Protein–RNA interactions for Protein: O00743

PPP6C, Serine/threonine-protein phosphatase 6 catalytic subunit, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6CO00743 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PPP6CO00743 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PPP6CO00743 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PPP6CO00743 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PPP6CO00743 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PPP6CO00743 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.69■□□□□ 0.58
PPP6CO00743 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PPP6CO00743 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PPP6CO00743 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PPP6CO00743 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PPP6CO00743 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PPP6CO00743 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PPP6CO00743 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PPP6CO00743 AC008403.3-201ENST00000598924 454 ntBASIC18.69■□□□□ 0.58
PPP6CO00743 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.69■□□□□ 0.58
PPP6CO00743 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.69■□□□□ 0.58
PPP6CO00743 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PPP6CO00743 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.69■□□□□ 0.58
PPP6CO00743 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PPP6CO00743 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PPP6CO00743 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.69■□□□□ 0.58
PPP6CO00743 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PPP6CO00743 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PPP6CO00743 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PPP6CO00743 AC009113.1-201ENST00000570267 2443 ntBASIC18.69■□□□□ 0.58
PPP6CO00743 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PPP6CO00743 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.68■□□□□ 0.58
PPP6CO00743 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PPP6CO00743 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PPP6CO00743 AC007613.1-201ENST00000572811 2597 ntBASIC18.68■□□□□ 0.58
PPP6CO00743 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
PPP6CO00743 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PPP6CO00743 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PPP6CO00743 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.68■□□□□ 0.58
PPP6CO00743 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PPP6CO00743 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.68■□□□□ 0.58
PPP6CO00743 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PPP6CO00743 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
PPP6CO00743 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.68■□□□□ 0.58
PPP6CO00743 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PPP6CO00743 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PPP6CO00743 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PPP6CO00743 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PPP6CO00743 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.68■□□□□ 0.58
PPP6CO00743 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PPP6CO00743 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PPP6CO00743 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PPP6CO00743 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PPP6CO00743 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PPP6CO00743 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PPP6CO00743 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PPP6CO00743 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PPP6CO00743 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.67■□□□□ 0.58
PPP6CO00743 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PPP6CO00743 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.67■□□□□ 0.58
PPP6CO00743 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PPP6CO00743 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PPP6CO00743 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PPP6CO00743 AL355802.2-201ENST00000402069 882 ntBASIC18.67■□□□□ 0.58
PPP6CO00743 HLA-L-209ENST00000420110 1011 ntBASIC18.67■□□□□ 0.58
PPP6CO00743 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.67■□□□□ 0.58
PPP6CO00743 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PPP6CO00743 UNC93B5-201ENST00000530315 699 ntBASIC18.67■□□□□ 0.58
PPP6CO00743 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.67■□□□□ 0.58
PPP6CO00743 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PPP6CO00743 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PPP6CO00743 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PPP6CO00743 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PPP6CO00743 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PPP6CO00743 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PPP6CO00743 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PPP6CO00743 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PPP6CO00743 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PPP6CO00743 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PPP6CO00743 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PPP6CO00743 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PPP6CO00743 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPP6CO00743 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PPP6CO00743 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.66■□□□□ 0.58
PPP6CO00743 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPP6CO00743 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
PPP6CO00743 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.66■□□□□ 0.58
PPP6CO00743 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PPP6CO00743 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
PPP6CO00743 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.66■□□□□ 0.58
PPP6CO00743 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PPP6CO00743 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPP6CO00743 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
PPP6CO00743 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.66■□□□□ 0.58
PPP6CO00743 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPP6CO00743 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPP6CO00743 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PPP6CO00743 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PPP6CO00743 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.66■□□□□ 0.58
PPP6CO00743 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPP6CO00743 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
PPP6CO00743 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.66■□□□□ 0.58
PPP6CO00743 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.66■□□□□ 0.58
PPP6CO00743 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPP6CO00743 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms