Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NTN3O00634 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NTN3O00634 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NTN3O00634 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NTN3O00634 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NTN3O00634 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NTN3O00634 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NTN3O00634 AL450487.1-201ENST00000426799 995 ntBASIC18.24■□□□□ 0.51
NTN3O00634 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NTN3O00634 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.24■□□□□ 0.51
NTN3O00634 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.24■□□□□ 0.51
NTN3O00634 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.24■□□□□ 0.51
NTN3O00634 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.24■□□□□ 0.51
NTN3O00634 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.24■□□□□ 0.51
NTN3O00634 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NTN3O00634 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.24■□□□□ 0.51
NTN3O00634 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NTN3O00634 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NTN3O00634 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NTN3O00634 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NTN3O00634 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.24■□□□□ 0.51
NTN3O00634 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NTN3O00634 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.23■□□□□ 0.51
NTN3O00634 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NTN3O00634 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NTN3O00634 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NTN3O00634 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NTN3O00634 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NTN3O00634 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NTN3O00634 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NTN3O00634 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NTN3O00634 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NTN3O00634 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NTN3O00634 HBZP1-201ENST00000354915 429 ntBASIC18.23■□□□□ 0.51
NTN3O00634 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NTN3O00634 ATP5G2P1-201ENST00000433580 426 ntBASIC18.23■□□□□ 0.51
NTN3O00634 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NTN3O00634 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.23■□□□□ 0.51
NTN3O00634 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.23■□□□□ 0.51
NTN3O00634 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.23■□□□□ 0.51
NTN3O00634 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.23■□□□□ 0.51
NTN3O00634 CLEC4GP1-201ENST00000596555 870 ntBASIC18.23■□□□□ 0.51
NTN3O00634 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NTN3O00634 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NTN3O00634 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NTN3O00634 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NTN3O00634 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NTN3O00634 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NTN3O00634 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NTN3O00634 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NTN3O00634 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.22■□□□□ 0.51
NTN3O00634 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
NTN3O00634 RASA4DP-201ENST00000460726 1199 ntBASIC18.22■□□□□ 0.51
NTN3O00634 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.22■□□□□ 0.51
NTN3O00634 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NTN3O00634 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.22■□□□□ 0.51
NTN3O00634 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.22■□□□□ 0.51
NTN3O00634 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NTN3O00634 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NTN3O00634 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NTN3O00634 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
NTN3O00634 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.22■□□□□ 0.51
NTN3O00634 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.22■□□□□ 0.51
NTN3O00634 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NTN3O00634 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.22■□□□□ 0.51
NTN3O00634 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NTN3O00634 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NTN3O00634 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.21■□□□□ 0.51
NTN3O00634 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NTN3O00634 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NTN3O00634 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NTN3O00634 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NTN3O00634 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NTN3O00634 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NTN3O00634 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NTN3O00634 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NTN3O00634 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NTN3O00634 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NTN3O00634 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.21■□□□□ 0.51
NTN3O00634 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NTN3O00634 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NTN3O00634 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.21■□□□□ 0.51
NTN3O00634 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.21■□□□□ 0.51
NTN3O00634 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
NTN3O00634 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NTN3O00634 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NTN3O00634 AL137060.1-201ENST00000618151 2648 ntBASIC18.21■□□□□ 0.51
NTN3O00634 SDHAP1-207ENST00000440850 2000 ntBASIC18.21■□□□□ 0.51
NTN3O00634 GPAT2P1-201ENST00000444924 1672 ntBASIC18.21■□□□□ 0.51
NTN3O00634 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.21■□□□□ 0.51
NTN3O00634 TCF3P1-201ENST00000423021 1937 ntBASIC18.21■□□□□ 0.51
NTN3O00634 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NTN3O00634 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NTN3O00634 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.21■□□□□ 0.51
NTN3O00634 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
NTN3O00634 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.21■□□□□ 0.5
NTN3O00634 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NTN3O00634 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.2■□□□□ 0.5
NTN3O00634 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NTN3O00634 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms