Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL390719.1-204ENST00000412397 1219 ntBASIC16.35■□□□□ 0.21
SDCBPO00560 DUSP5P2-201ENST00000426873 1033 ntBASIC16.35■□□□□ 0.21
SDCBPO00560 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.35■□□□□ 0.21
SDCBPO00560 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.35■□□□□ 0.21
SDCBPO00560 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.35■□□□□ 0.21
SDCBPO00560 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.35■□□□□ 0.21
SDCBPO00560 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.35■□□□□ 0.21
SDCBPO00560 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.35■□□□□ 0.21
SDCBPO00560 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SDCBPO00560 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SDCBPO00560 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SDCBPO00560 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.35■□□□□ 0.21
SDCBPO00560 AC018470.1-201ENST00000624790 3129 ntBASIC16.35■□□□□ 0.21
SDCBPO00560 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SDCBPO00560 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SDCBPO00560 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SDCBPO00560 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.35■□□□□ 0.21
SDCBPO00560 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SDCBPO00560 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SDCBPO00560 AC009113.1-201ENST00000570267 2443 ntBASIC16.35■□□□□ 0.21
SDCBPO00560 HTR7P1-202ENST00000624664 4411 ntBASIC16.35■□□□□ 0.21
SDCBPO00560 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SDCBPO00560 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SDCBPO00560 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SDCBPO00560 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SDCBPO00560 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SDCBPO00560 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SDCBPO00560 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SDCBPO00560 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SDCBPO00560 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SDCBPO00560 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.34■□□□□ 0.21
SDCBPO00560 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SDCBPO00560 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SDCBPO00560 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SDCBPO00560 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SDCBPO00560 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.34■□□□□ 0.21
SDCBPO00560 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SDCBPO00560 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SDCBPO00560 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SDCBPO00560 NCF1B-203ENST00000435988 1254 ntBASIC16.34■□□□□ 0.21
SDCBPO00560 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SDCBPO00560 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.34■□□□□ 0.21
SDCBPO00560 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.34■□□□□ 0.21
SDCBPO00560 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.34■□□□□ 0.21
SDCBPO00560 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.34■□□□□ 0.21
SDCBPO00560 AC092118.2-201ENST00000613495 667 ntBASIC16.34■□□□□ 0.21
SDCBPO00560 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.34■□□□□ 0.21
SDCBPO00560 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.34■□□□□ 0.21
SDCBPO00560 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.34■□□□□ 0.21
SDCBPO00560 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SDCBPO00560 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SDCBPO00560 AC005332.8-201ENST00000622750 2735 ntBASIC16.34■□□□□ 0.21
SDCBPO00560 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.34■□□□□ 0.21
SDCBPO00560 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SDCBPO00560 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SDCBPO00560 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SDCBPO00560 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.34■□□□□ 0.21
SDCBPO00560 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.34■□□□□ 0.21
SDCBPO00560 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.34■□□□□ 0.21
SDCBPO00560 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.34■□□□□ 0.21
SDCBPO00560 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SDCBPO00560 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SDCBPO00560 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
SDCBPO00560 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.33■□□□□ 0.21
SDCBPO00560 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SDCBPO00560 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SDCBPO00560 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.33■□□□□ 0.21
SDCBPO00560 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SDCBPO00560 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SDCBPO00560 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
SDCBPO00560 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SDCBPO00560 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.33■□□□□ 0.21
SDCBPO00560 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SDCBPO00560 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SDCBPO00560 LETM1P2-201ENST00000597330 2178 ntBASIC16.33■□□□□ 0.2
SDCBPO00560 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
SDCBPO00560 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SDCBPO00560 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.33■□□□□ 0.2
SDCBPO00560 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SDCBPO00560 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SDCBPO00560 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SDCBPO00560 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SDCBPO00560 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.33■□□□□ 0.2
SDCBPO00560 TSPY6P-201ENST00000448518 926 ntBASIC16.33■□□□□ 0.2
SDCBPO00560 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SDCBPO00560 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.33■□□□□ 0.2
SDCBPO00560 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SDCBPO00560 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
SDCBPO00560 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SDCBPO00560 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SDCBPO00560 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SDCBPO00560 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SDCBPO00560 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SDCBPO00560 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.33■□□□□ 0.2
SDCBPO00560 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SDCBPO00560 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SDCBPO00560 TEX21P-204ENST00000641479 1693 ntBASIC16.33■□□□□ 0.2
SDCBPO00560 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SDCBPO00560 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SDCBPO00560 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms