Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 AP005242.2-201ENST00000580065 1175 ntBASIC20.32■□□□□ 0.84
CLDN5O00501 KRT8P11-201ENST00000409686 1436 ntBASIC20.32■□□□□ 0.84
CLDN5O00501 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN5O00501 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN5O00501 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN5O00501 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.32■□□□□ 0.84
CLDN5O00501 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN5O00501 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN5O00501 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CLDN5O00501 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN5O00501 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN5O00501 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN5O00501 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN5O00501 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN5O00501 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
CLDN5O00501 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN5O00501 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN5O00501 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.31■□□□□ 0.84
CLDN5O00501 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN5O00501 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN5O00501 AC012306.2-201ENST00000609350 630 ntBASIC20.31■□□□□ 0.84
CLDN5O00501 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.31■□□□□ 0.84
CLDN5O00501 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CLDN5O00501 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN5O00501 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.31■□□□□ 0.84
CLDN5O00501 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.3■□□□□ 0.84
CLDN5O00501 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN5O00501 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.3■□□□□ 0.84
CLDN5O00501 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
CLDN5O00501 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CLDN5O00501 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN5O00501 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.3■□□□□ 0.84
CLDN5O00501 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN5O00501 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.3■□□□□ 0.84
CLDN5O00501 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.3■□□□□ 0.84
CLDN5O00501 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.3■□□□□ 0.84
CLDN5O00501 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.3■□□□□ 0.84
CLDN5O00501 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.3■□□□□ 0.84
CLDN5O00501 NAPSB-206ENST00000562112 1266 ntBASIC20.3■□□□□ 0.84
CLDN5O00501 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.3■□□□□ 0.84
CLDN5O00501 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.3■□□□□ 0.84
CLDN5O00501 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CLDN5O00501 LINC01023-201ENST00000606054 436 ntBASIC20.3■□□□□ 0.84
CLDN5O00501 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN5O00501 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN5O00501 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN5O00501 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN5O00501 AC096733.2-201ENST00000609937 1394 ntBASIC20.3■□□□□ 0.84
CLDN5O00501 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN5O00501 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CLDN5O00501 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN5O00501 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN5O00501 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN5O00501 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.29■□□□□ 0.84
CLDN5O00501 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.29■□□□□ 0.84
CLDN5O00501 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CLDN5O00501 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CLDN5O00501 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN5O00501 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.29■□□□□ 0.84
CLDN5O00501 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN5O00501 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN5O00501 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.29■□□□□ 0.84
CLDN5O00501 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.29■□□□□ 0.84
CLDN5O00501 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.29■□□□□ 0.84
CLDN5O00501 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.29■□□□□ 0.84
CLDN5O00501 AC097493.4-201ENST00000641197 219 ntBASIC20.29■□□□□ 0.84
CLDN5O00501 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.29■□□□□ 0.84
CLDN5O00501 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN5O00501 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN5O00501 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN5O00501 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CLDN5O00501 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN5O00501 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN5O00501 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN5O00501 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN5O00501 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.28■□□□□ 0.84
CLDN5O00501 INGX-201ENST00000359239 846 ntBASIC20.28■□□□□ 0.84
CLDN5O00501 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.28■□□□□ 0.84
CLDN5O00501 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN5O00501 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.28■□□□□ 0.84
CLDN5O00501 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.28■□□□□ 0.84
CLDN5O00501 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CLDN5O00501 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.28■□□□□ 0.84
CLDN5O00501 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.28■□□□□ 0.84
CLDN5O00501 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN5O00501 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN5O00501 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN5O00501 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN5O00501 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
CLDN5O00501 AC093484.2-201ENST00000580996 2166 ntBASIC20.28■□□□□ 0.84
CLDN5O00501 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN5O00501 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN5O00501 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN5O00501 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN5O00501 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN5O00501 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN5O00501 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.27■□□□□ 0.84
CLDN5O00501 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN5O00501 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.27■□□□□ 0.84
CLDN5O00501 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms