Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01549A6NIU2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 ABALON-201ENST00000629058 1903 ntBASIC13.66□□□□□ -0.22
LINC01549A6NIU2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 AC104581.1-202ENST00000635932 2618 ntBASIC13.66□□□□□ -0.22
LINC01549A6NIU2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 AC099791.1-201ENST00000416440 715 ntBASIC13.66□□□□□ -0.22
LINC01549A6NIU2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 AC008764.7-201ENST00000593779 1081 ntBASIC13.66□□□□□ -0.22
LINC01549A6NIU2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 IRX1P1-201ENST00000438849 1838 ntBASIC13.66□□□□□ -0.22
LINC01549A6NIU2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.66□□□□□ -0.22
LINC01549A6NIU2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01549A6NIU2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01549A6NIU2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC01549A6NIU2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC01549A6NIU2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
LINC01549A6NIU2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01549A6NIU2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.65□□□□□ -0.22
LINC01549A6NIU2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LINC01549A6NIU2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01549A6NIU2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01549A6NIU2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01549A6NIU2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01549A6NIU2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms