Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
TUBAL3A6NHL2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.27■□□□□ 0.35
TUBAL3A6NHL2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.27■□□□□ 0.35
TUBAL3A6NHL2 LINC01568-207ENST00000641790 1380 ntBASIC17.27■□□□□ 0.35
TUBAL3A6NHL2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TUBAL3A6NHL2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TUBAL3A6NHL2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TUBAL3A6NHL2 AP006587.1-201ENST00000534129 1502 ntBASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 AL049597.2-201ENST00000565575 961 ntBASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBAL3A6NHL2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBAL3A6NHL2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TUBAL3A6NHL2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.25■□□□□ 0.35
TUBAL3A6NHL2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBAL3A6NHL2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TUBAL3A6NHL2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.25■□□□□ 0.35
TUBAL3A6NHL2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TUBAL3A6NHL2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBAL3A6NHL2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBAL3A6NHL2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.25■□□□□ 0.35
TUBAL3A6NHL2 AC116562.2-201ENST00000507042 360 ntBASIC17.25■□□□□ 0.35
TUBAL3A6NHL2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.25■□□□□ 0.35
TUBAL3A6NHL2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.25■□□□□ 0.35
TUBAL3A6NHL2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.25■□□□□ 0.35
TUBAL3A6NHL2 AL445228.2-201ENST00000605589 952 ntBASIC17.25■□□□□ 0.35
TUBAL3A6NHL2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TUBAL3A6NHL2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TUBAL3A6NHL2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TUBAL3A6NHL2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TUBAL3A6NHL2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.25■□□□□ 0.35
TUBAL3A6NHL2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TUBAL3A6NHL2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 KRT18P22-201ENST00000402024 1347 ntBASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 PLK5-205ENST00000642079 1969 ntBASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 KRT8P9-201ENST00000558927 1449 ntBASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 AL590326.2-201ENST00000625139 305 ntBASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 AL031985.4-201ENST00000642138 673 ntBASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 AL158211.5-201ENST00000623583 2518 ntBASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 FP700111.2-201ENST00000619190 1892 ntBASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBAL3A6NHL2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBAL3A6NHL2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBAL3A6NHL2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
TUBAL3A6NHL2 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.23■□□□□ 0.35
TUBAL3A6NHL2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBAL3A6NHL2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.23■□□□□ 0.35
TUBAL3A6NHL2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBAL3A6NHL2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.23■□□□□ 0.35
TUBAL3A6NHL2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBAL3A6NHL2 ARMC10P1-201ENST00000313754 855 ntBASIC17.23■□□□□ 0.35
TUBAL3A6NHL2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBAL3A6NHL2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.23■□□□□ 0.35
TUBAL3A6NHL2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms