Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 AC117947.1-201ENST00000427448 529 ntBASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 AL512604.3-201ENST00000569583 964 ntBASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 KRT8P11-201ENST00000409686 1436 ntBASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D3FA6NER0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 LINC01238-205ENST00000567549 1107 ntBASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.15■□□□□ 0.66
TBC1D3FA6NER0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
TBC1D3FA6NER0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TBC1D3FA6NER0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 COX11P1-201ENST00000489116 835 ntBASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 PRSS44-201ENST00000515154 1146 ntBASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 AP003041.3-201ENST00000527151 707 ntBASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 AC141257.4-201ENST00000634557 245 ntBASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 AC136944.6-201ENST00000634818 245 ntBASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.14■□□□□ 0.65
TBC1D3FA6NER0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 RNF152P1-201ENST00000397754 604 ntBASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 AC104417.2-201ENST00000562989 1793 ntBASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TBC1D3FA6NER0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms