Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.92■□□□□ 0.3
MBD3L3A6NE82 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MBD3L3A6NE82 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
MBD3L3A6NE82 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MBD3L3A6NE82 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MBD3L3A6NE82 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.92■□□□□ 0.3
MBD3L3A6NE82 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 AP000523.1-201ENST00000398242 1049 ntBASIC16.91■□□□□ 0.3
MBD3L3A6NE82 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.91■□□□□ 0.3
MBD3L3A6NE82 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 AC011558.1-201ENST00000623459 338 ntBASIC16.91■□□□□ 0.3
MBD3L3A6NE82 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MBD3L3A6NE82 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 HOMER2P1-201ENST00000455653 964 ntBASIC16.9■□□□□ 0.3
MBD3L3A6NE82 AC092647.4-201ENST00000457211 535 ntBASIC16.9■□□□□ 0.3
MBD3L3A6NE82 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
MBD3L3A6NE82 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
MBD3L3A6NE82 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.89■□□□□ 0.3
MBD3L3A6NE82 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
MBD3L3A6NE82 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 NEK4P2-201ENST00000580004 1012 ntBASIC16.89■□□□□ 0.29
MBD3L3A6NE82 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MBD3L3A6NE82 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.88■□□□□ 0.29
MBD3L3A6NE82 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.88■□□□□ 0.29
MBD3L3A6NE82 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms