Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV3S1A0A5B6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV3S1A0A5B6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.02■□□□□ 0.48
TCRBV3S1A0A5B6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV3S1A0A5B6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV3S1A0A5B6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV3S1A0A5B6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV3S1A0A5B6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV3S1A0A5B6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV3S1A0A5B6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.02■□□□□ 0.48
TCRBV3S1A0A5B6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.02■□□□□ 0.48
TCRBV3S1A0A5B6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV3S1A0A5B6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.02■□□□□ 0.48
TCRBV3S1A0A5B6 C2orf69P4-201ENST00000565394 541 ntBASIC18.02■□□□□ 0.48
TCRBV3S1A0A5B6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.02■□□□□ 0.48
TCRBV3S1A0A5B6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV3S1A0A5B6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TCRBV3S1A0A5B6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TCRBV3S1A0A5B6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.02■□□□□ 0.48
TCRBV3S1A0A5B6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TCRBV3S1A0A5B6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.47
TCRBV3S1A0A5B6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
TCRBV3S1A0A5B6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.02■□□□□ 0.47
TCRBV3S1A0A5B6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
TCRBV3S1A0A5B6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TCRBV3S1A0A5B6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TCRBV3S1A0A5B6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TCRBV3S1A0A5B6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TCRBV3S1A0A5B6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TCRBV3S1A0A5B6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 CYP2T3P-201ENST00000601990 817 ntBASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 AC131212.1-201ENST00000613771 668 ntBASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV3S1A0A5B6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18■□□□□ 0.47
TCRBV3S1A0A5B6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 AC142381.2-201ENST00000566120 298 ntBASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV3S1A0A5B6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms