Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 AC137761.2-201ENST00000561729 223 ntBASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 AC145350.3-201ENST00000569033 163 ntBASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 ZNRF2P3-201ENST00000424200 374 ntBASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 AC008694.1-202ENST00000636953 945 ntBASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV13-1A0A0B4J241 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 AC007613.1-201ENST00000572811 2597 ntBASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 STX7-201ENST00000367937 1090 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 AC069236.1-201ENST00000604339 616 ntBASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-1A0A0B4J241 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms