Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 AC109464.2-201ENST00000510242 943 ntBASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 RNU6-150P-201ENST00000516237 95 ntBASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 NTS-203ENST00000551529 801 ntTSL 3 BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 MIR4458-201ENST00000578872 75 ntBASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 AC113403.1-201ENST00000604910 193 ntBASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 OR5H6-203ENST00000642105 978 ntBASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 NEAT1-202ENST00000501122 22743 ntBASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 SMG1P4-204ENST00000523028 4131 ntBASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
SYNPO2Q9UMS6 AC139769.1-204ENST00000472297 1931 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 RN7SKP226-201ENST00000364912 300 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 RNU5E-5P-201ENST00000365379 116 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 RNA5SP366-201ENST00000365454 123 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 SNORA40.3-201ENST00000390964 122 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 VN1R8P-201ENST00000407739 893 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 RNU2-28P-201ENST00000410457 189 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 SNORA74C-2-201ENST00000411179 201 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 HMGB3P23-201ENST00000414981 585 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 DNAJC19P4-201ENST00000440115 345 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 PHBP16-201ENST00000446318 950 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 AC091564.1-201ENST00000464563 479 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 KLF3P2-201ENST00000465138 268 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 AC109327.1-201ENST00000471666 403 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 AC010683.1-201ENST00000473673 378 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 RN7SL812P-201ENST00000493791 279 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 AL358832.1-201ENST00000497800 389 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 KRT19P6-201ENST00000510983 209 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 RNA5SP446-201ENST00000515955 82 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 RNU6-506P-201ENST00000516553 94 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 AP000790.1-201ENST00000528891 737 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 MIR3913-1-201ENST00000577744 102 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 SNORD39.3-201ENST00000584451 71 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 RPL7P50-201ENST00000600588 727 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 AL731566.2-201ENST00000618971 317 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 AL672167.1-204ENST00000641875 3017 ntBASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SYNPO2Q9UMS6 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNPO2Q9UMS6 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNPO2Q9UMS6 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
SYNPO2Q9UMS6 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
SYNPO2Q9UMS6 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SYNPO2Q9UMS6 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNPO2Q9UMS6 OR4G2P-201ENST00000328113 903 ntBASIC5.18□□□□□ -1.58
SYNPO2Q9UMS6 RNU6-462P-201ENST00000362659 105 ntBASIC5.18□□□□□ -1.58
SYNPO2Q9UMS6 RNU6-777P-201ENST00000364265 104 ntBASIC5.18□□□□□ -1.58
SYNPO2Q9UMS6 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms