Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 RNA5SP54-201ENST00000516951 92 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RN7SKP60-201ENST00000516985 239 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 IGHVIII-51-1-201ENST00000519403 302 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 IGKV2D-18-201ENST00000519785 375 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 IGLV3-29-201ENST00000520084 244 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AP002469.1-201ENST00000526011 1043 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 ASB9P1-201ENST00000557146 793 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 EIF4EBP1P1-201ENST00000557776 341 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 DPPA5P2-201ENST00000561451 299 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 TTC39A-AS1-202ENST00000568425 554 ntTSL 3 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AC093330.1-204ENST00000582763 396 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 MIR4266-201ENST00000583300 55 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 MIR5197-201ENST00000583721 112 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 MIR4664-201ENST00000583819 71 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 SNORD39.3-201ENST00000584451 71 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 IGFL1P2-201ENST00000593820 330 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 IPO5P1-202ENST00000600039 287 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AL591034.3-201ENST00000605511 685 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 CUTA-214ENST00000607266 661 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 HIST1H4G-201ENST00000611444 297 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 U3.50-201ENST00000611947 228 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AL354980.1-201ENST00000612670 234 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AL592227.1-201ENST00000614748 126 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AC138894.4-201ENST00000616703 256 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RFPL3-AS1_1.1-201ENST00000617561 88 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 FLT1-208ENST00000617835 434 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 MIR6732-201ENST00000619365 60 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AC110801.1-201ENST00000623590 212 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AC005691.1-201ENST00000624723 401 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 Metazoa_SRP.208-201ENST00000629083 297 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RANBP2-205ENST00000629728 156 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 FAM236C-202ENST00000636532 451 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 MRNIP-204ENST00000518219 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 MFSD8-218ENST00000641186 4448 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 CNR1-204ENST00000428600 1550 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 PPP2R5D-203ENST00000461010 1558 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 SEPT4-206ENST00000457347 1795 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 CES5A-206ENST00000521992 2258 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 OLMALINC-201ENST00000454935 2551 ntTSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 CAPN3-205ENST00000357568 2669 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 ZNF143-204ENST00000396604 2696 ntAPPRIS ALT1 TSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 CEACAM5-201ENST00000221992 2874 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 CDH26-202ENST00000348616 3182 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 RBFOX1-201ENST00000311745 3268 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 CAST-202ENST00000325674 3356 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 NFKB1-212ENST00000600343 4010 ntTSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 TREML2-201ENST00000483722 3302 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 OR14L1P-202ENST00000641545 3009 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 ENTPD1-AS1-211ENST00000454638 2933 ntTSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 STPG1-203ENST00000374409 2804 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 LY9-201ENST00000263285 2443 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 STRADA-230ENST00000638702 2140 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AL034417.4-201ENST00000641354 2101 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 PARP11-204ENST00000447133 4377 ntTSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 CICP22-201ENST00000432801 1319 ntBASIC1.66□□□□□ -2.14
KRTAP4-4Q9BYR3 CALCOCO2-201ENST00000258947 3682 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 HYDIN-203ENST00000321489 3685 ntAPPRIS P3 TSL 2 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 GPLD1-201ENST00000230036 3489 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 LINC00461-201ENST00000500197 3381 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 CEP112-203ENST00000535342 3392 ntAPPRIS P4 TSL 2 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 EXOC7-220ENST00000607838 3353 ntTSL 5 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 XPNPEP2-202ENST00000371106 3270 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 TMEM150C-204ENST00000515780 3296 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms