Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 RNU6-89P-201ENST00000606519 100 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF43Q68DV7 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF43Q68DV7 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 ASNSP3-201ENST00000451989 1306 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF43Q68DV7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF43Q68DV7 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF43Q68DV7 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF43Q68DV7 RNA5SP326-201ENST00000363209 110 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 U8.4-201ENST00000363626 134 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 Y_RNA.176-201ENST00000363815 109 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 RNU6-115P-201ENST00000364310 107 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 RNU6-108P-201ENST00000365558 107 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 DEFB109C-201ENST00000382575 264 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 DEFB109B-201ENST00000382656 264 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 MIR1-2-201ENST00000384961 85 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 RNU6-370P-201ENST00000411008 104 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 HMGB3P2-201ENST00000411913 584 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 AC104837.2-201ENST00000427236 424 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 ERLEC1P1-201ENST00000433806 578 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 RPS24P13-201ENST00000442520 397 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 AL035090.1-201ENST00000454835 332 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 RNU7-136P-201ENST00000458819 69 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 RN7SL222P-201ENST00000476452 299 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 MRPS35P2-201ENST00000508242 191 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 RNU6-764P-201ENST00000516396 105 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 AC009902.1-201ENST00000519351 183 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 PMS2P3-207ENST00000529061 717 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 AC126177.5-201ENST00000549599 178 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 MIR4436B2-201ENST00000581415 91 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 MIR4436B1-201ENST00000583272 91 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 AC012603.1-201ENST00000606424 528 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 AC000068.2-201ENST00000608816 460 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF43Q68DV7 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF43Q68DV7 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF43Q68DV7 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF43Q68DV7 AP004289.2-201ENST00000444413 1457 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF43Q68DV7 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
RNF43Q68DV7 AL022311.1-201ENST00000623726 19416 ntBASIC5.69□□□□□ -1.5
RNF43Q68DV7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF43Q68DV7 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF43Q68DV7 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.68□□□□□ -1.5
RNF43Q68DV7 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF43Q68DV7 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RNF43Q68DV7 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF43Q68DV7 AC073136.1-201ENST00000449426 2884 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF43Q68DV7 RPL23P2-201ENST00000320371 421 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 AL121886.1-201ENST00000358609 435 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 Y_RNA.100-201ENST00000363141 102 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 RNU6-1097P-201ENST00000363586 107 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 RNU4-1-201ENST00000363925 141 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 SNORA62.2-201ENST00000364672 152 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 RNU6-996P-201ENST00000365438 107 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.68□□□□□ -1.5
RNF43Q68DV7 RNU6-657P-201ENST00000383904 107 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 RNU6-730P-201ENST00000383954 104 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 RNU6-26P-201ENST00000383985 107 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 SNORD3H-201ENST00000384486 214 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 MIR551A-201ENST00000385042 96 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 RNU1-149P-201ENST00000390870 161 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 AL009179.1-201ENST00000406085 265 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 AC096921.1-201ENST00000411661 375 ntBASIC5.68□□□□□ -1.5
RNF43Q68DV7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms