Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.8□□□□□ -1.8
LYSMD4Q5XG99 AL390838.2-201ENST00000602394 274 ntBASIC3.8□□□□□ -1.8
LYSMD4Q5XG99 RNA5SP108-201ENST00000605921 117 ntBASIC3.8□□□□□ -1.8
LYSMD4Q5XG99 AC092954.1-201ENST00000609121 445 ntBASIC3.8□□□□□ -1.8
LYSMD4Q5XG99 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.8□□□□□ -1.8
LYSMD4Q5XG99 AC023158.2-201ENST00000614876 543 ntBASIC3.8□□□□□ -1.8
LYSMD4Q5XG99 AC120349.3-201ENST00000624377 529 ntBASIC3.8□□□□□ -1.8
LYSMD4Q5XG99 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.8□□□□□ -1.8
LYSMD4Q5XG99 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
LYSMD4Q5XG99 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LYSMD4Q5XG99 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LYSMD4Q5XG99 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LYSMD4Q5XG99 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LYSMD4Q5XG99 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 RNA5SP51-201ENST00000364750 119 ntBASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 MIR708-201ENST00000390708 88 ntBASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 SNORA11.2-201ENST00000408318 127 ntBASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 Z92545.1-201ENST00000411782 234 ntBASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 MTND4P22-201ENST00000413116 1169 ntBASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 AL161449.1-201ENST00000414531 1199 ntBASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 RPL22P18-201ENST00000417197 377 ntBASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 AC092832.1-201ENST00000422934 400 ntBASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 SKP1P3-201ENST00000429280 487 ntBASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 RPL31P54-201ENST00000429803 370 ntBASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 AC021146.3-201ENST00000511911 260 ntBASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 OR5B10P-201ENST00000532869 642 ntBASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 AC006960.3-201ENST00000561845 705 ntBASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 AP001269.3-201ENST00000588718 329 ntBASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 VN1R78P-201ENST00000597393 564 ntBASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 AC009464.1-201ENST00000615731 469 ntBASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 AC068722.2-201ENST00000618734 544 ntBASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 AC022509.4-201ENST00000621404 572 ntBASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LYSMD4Q5XG99 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 RNU4-92P-201ENST00000363783 136 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 MIR199A2-201ENST00000385289 110 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 RNA5SP239-201ENST00000410218 129 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 ATP5A1P2-201ENST00000412323 255 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 LUZP4P1-201ENST00000415420 344 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 MTCO2P21-201ENST00000419780 677 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 USP9YP7-201ENST00000436723 430 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 HMGB1P37-201ENST00000439613 609 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 RPL23AP76-201ENST00000441860 458 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 AL590399.6-201ENST00000446396 307 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 USP9YP32-201ENST00000452432 430 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 RFC5P1-201ENST00000454419 874 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 AC007967.1-201ENST00000455422 1159 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 NECAP1P2-201ENST00000455668 727 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 RPL32P34-201ENST00000486380 400 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 RNF138P1-201ENST00000502765 546 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms