Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HADHAP40939 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HADHAP40939 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HADHAP40939 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.14□□□□□ -1.75
HADHAP40939 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HADHAP40939 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.14□□□□□ -1.75
HADHAP40939 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HADHAP40939 SNORA60-201ENST00000362396 134 ntBASIC4.14□□□□□ -1.75
HADHAP40939 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
HADHAP40939 HMGB1P17-201ENST00000403495 628 ntBASIC4.14□□□□□ -1.75
HADHAP40939 RN7SKP263-201ENST00000411194 309 ntBASIC4.14□□□□□ -1.75
HADHAP40939 PGBD4P8-201ENST00000412993 562 ntBASIC4.14□□□□□ -1.75
HADHAP40939 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.14□□□□□ -1.75
HADHAP40939 AC108032.1-201ENST00000416706 207 ntBASIC4.14□□□□□ -1.75
HADHAP40939 PTP4A1P5-201ENST00000420305 455 ntBASIC4.14□□□□□ -1.75
HADHAP40939 XKRYP1-201ENST00000423438 492 ntBASIC4.14□□□□□ -1.75
HADHAP40939 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.14□□□□□ -1.75
HADHAP40939 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.14□□□□□ -1.75
HADHAP40939 XKRYP2-201ENST00000432915 492 ntBASIC4.14□□□□□ -1.75
HADHAP40939 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.14□□□□□ -1.75
HADHAP40939 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.14□□□□□ -1.75
HADHAP40939 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.14□□□□□ -1.75
HADHAP40939 NPM1P49-201ENST00000448027 714 ntBASIC4.14□□□□□ -1.75
HADHAP40939 USP9YP25-201ENST00000457708 443 ntBASIC4.14□□□□□ -1.75
HADHAP40939 RPL9P32-201ENST00000464118 620 ntBASIC4.14□□□□□ -1.75
HADHAP40939 RPL7P1-201ENST00000468161 747 ntBASIC4.14□□□□□ -1.75
HADHAP40939 RPL7P9-201ENST00000468715 747 ntBASIC4.14□□□□□ -1.75
HADHAP40939 AC109458.1-201ENST00000508858 316 ntBASIC4.14□□□□□ -1.75
HADHAP40939 SNORA31.9-201ENST00000516429 84 ntBASIC4.14□□□□□ -1.75
HADHAP40939 RNU5A-4P-201ENST00000516588 111 ntBASIC4.14□□□□□ -1.75
HADHAP40939 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.14□□□□□ -1.75
HADHAP40939 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.14□□□□□ -1.75
HADHAP40939 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.14□□□□□ -1.75
HADHAP40939 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.14□□□□□ -1.75
HADHAP40939 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.14□□□□□ -1.75
HADHAP40939 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
HADHAP40939 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.14□□□□□ -1.75
HADHAP40939 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.14□□□□□ -1.75
HADHAP40939 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.14□□□□□ -1.75
HADHAP40939 AC061975.8-201ENST00000587058 721 ntBASIC4.14□□□□□ -1.75
HADHAP40939 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.14□□□□□ -1.75
HADHAP40939 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.14□□□□□ -1.75
HADHAP40939 ARF4P1-201ENST00000605447 541 ntBASIC4.14□□□□□ -1.75
HADHAP40939 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.14□□□□□ -1.75
HADHAP40939 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.14□□□□□ -1.75
HADHAP40939 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.14□□□□□ -1.75
HADHAP40939 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HADHAP40939 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.14□□□□□ -1.75
HADHAP40939 MTND2P41-201ENST00000637599 773 ntBASIC4.14□□□□□ -1.75
HADHAP40939 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
HADHAP40939 EXOC5P1-201ENST00000510543 1969 ntBASIC4.14□□□□□ -1.75
HADHAP40939 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.14□□□□□ -1.75
HADHAP40939 LINC02471-203ENST00000641941 4752 ntBASIC4.14□□□□□ -1.75
HADHAP40939 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.14□□□□□ -1.75
HADHAP40939 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
HADHAP40939 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
HADHAP40939 AC066616.2-201ENST00000559334 1481 ntBASIC4.13□□□□□ -1.75
HADHAP40939 AC018555.1-201ENST00000567548 1980 ntBASIC4.13□□□□□ -1.75
HADHAP40939 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HADHAP40939 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.13□□□□□ -1.75
HADHAP40939 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HADHAP40939 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.13□□□□□ -1.75
HADHAP40939 Y_RNA.408-201ENST00000383987 102 ntBASIC4.13□□□□□ -1.75
HADHAP40939 MIR607-201ENST00000385241 96 ntBASIC4.13□□□□□ -1.75
HADHAP40939 AIMP1P1-201ENST00000418670 937 ntBASIC4.13□□□□□ -1.75
HADHAP40939 MTCO2P21-201ENST00000419780 677 ntBASIC4.13□□□□□ -1.75
HADHAP40939 MRPS18BP2-201ENST00000434310 759 ntBASIC4.13□□□□□ -1.75
HADHAP40939 RPL21P112-201ENST00000434403 463 ntBASIC4.13□□□□□ -1.75
HADHAP40939 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.13□□□□□ -1.75
HADHAP40939 RPL7P28-201ENST00000437739 740 ntBASIC4.13□□□□□ -1.75
HADHAP40939 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.13□□□□□ -1.75
HADHAP40939 MTND2P19-201ENST00000449129 1012 ntBASIC4.13□□□□□ -1.75
HADHAP40939 TRGVB-201ENST00000453257 471 ntBASIC4.13□□□□□ -1.75
HADHAP40939 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.13□□□□□ -1.75
HADHAP40939 snoU109.4-201ENST00000458953 143 ntBASIC4.13□□□□□ -1.75
HADHAP40939 RPL38P1-201ENST00000460914 211 ntBASIC4.13□□□□□ -1.75
HADHAP40939 RPL7P19-201ENST00000469948 618 ntBASIC4.13□□□□□ -1.75
HADHAP40939 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.13□□□□□ -1.75
HADHAP40939 RPL7P18-201ENST00000478965 734 ntBASIC4.13□□□□□ -1.75
HADHAP40939 NCOR1P1-202ENST00000486162 291 ntBASIC4.13□□□□□ -1.75
HADHAP40939 RPL29P14-201ENST00000495837 428 ntBASIC4.13□□□□□ -1.75
HADHAP40939 RPS27AP13-201ENST00000498403 237 ntBASIC4.13□□□□□ -1.75
HADHAP40939 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.13□□□□□ -1.75
HADHAP40939 AC010625.1-201ENST00000511296 403 ntBASIC4.13□□□□□ -1.75
HADHAP40939 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HADHAP40939 MTCO1P35-201ENST00000515270 228 ntBASIC4.13□□□□□ -1.75
HADHAP40939 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.13□□□□□ -1.75
HADHAP40939 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.13□□□□□ -1.75
HADHAP40939 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.13□□□□□ -1.75
HADHAP40939 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.13□□□□□ -1.75
HADHAP40939 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.13□□□□□ -1.75
HADHAP40939 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.13□□□□□ -1.75
HADHAP40939 VN1R82P-201ENST00000601481 356 ntBASIC4.13□□□□□ -1.75
HADHAP40939 AL592221.1-201ENST00000605266 382 ntBASIC4.13□□□□□ -1.75
HADHAP40939 AC131235.4-201ENST00000609288 620 ntBASIC4.13□□□□□ -1.75
HADHAP40939 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.13□□□□□ -1.75
HADHAP40939 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.13□□□□□ -1.75
HADHAP40939 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.13□□□□□ -1.75
HADHAP40939 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.13□□□□□ -1.75
HADHAP40939 AC116667.1-201ENST00000604855 2072 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms