Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.14□□□□□ -1.91
RFC3P40938 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.14□□□□□ -1.91
RFC3P40938 AL590396.2-201ENST00000636511 1041 ntBASIC3.14□□□□□ -1.91
RFC3P40938 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.14□□□□□ -1.91
RFC3P40938 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RFC3P40938 ZNF37BP-203ENST00000452306 1352 ntBASIC3.13□□□□□ -1.91
RFC3P40938 AL359893.1-201ENST00000447628 1580 ntBASIC3.13□□□□□ -1.91
RFC3P40938 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RFC3P40938 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.13□□□□□ -1.91
RFC3P40938 AP002088.1-201ENST00000382740 395 ntBASIC3.13□□□□□ -1.91
RFC3P40938 RNU6-1151P-201ENST00000384684 107 ntBASIC3.13□□□□□ -1.91
RFC3P40938 RNU6-796P-201ENST00000391086 107 ntBASIC3.13□□□□□ -1.91
RFC3P40938 SNORA48.8-201ENST00000391324 134 ntBASIC3.13□□□□□ -1.91
RFC3P40938 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RFC3P40938 U3.39-201ENST00000408569 239 ntBASIC3.13□□□□□ -1.91
RFC3P40938 AC073264.1-201ENST00000411508 416 ntBASIC3.13□□□□□ -1.91
RFC3P40938 AL158825.1-201ENST00000414735 521 ntBASIC3.13□□□□□ -1.91
RFC3P40938 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RFC3P40938 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.13□□□□□ -1.91
RFC3P40938 AC012498.1-201ENST00000424037 437 ntBASIC3.13□□□□□ -1.91
RFC3P40938 OSTCP5-201ENST00000425293 453 ntBASIC3.13□□□□□ -1.91
RFC3P40938 RSL24D1P8-201ENST00000434442 492 ntBASIC3.13□□□□□ -1.91
RFC3P40938 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.13□□□□□ -1.91
RFC3P40938 AC005019.1-201ENST00000436455 431 ntBASIC3.13□□□□□ -1.91
RFC3P40938 AC091862.1-201ENST00000438016 1100 ntBASIC3.13□□□□□ -1.91
RFC3P40938 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.13□□□□□ -1.91
RFC3P40938 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.13□□□□□ -1.91
RFC3P40938 HMGB1P38-201ENST00000490557 577 ntBASIC3.13□□□□□ -1.91
RFC3P40938 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.13□□□□□ -1.91
RFC3P40938 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.13□□□□□ -1.91
RFC3P40938 AC104108.1-201ENST00000509930 412 ntBASIC3.13□□□□□ -1.91
RFC3P40938 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.13□□□□□ -1.91
RFC3P40938 RNU6-488P-201ENST00000515918 99 ntBASIC3.13□□□□□ -1.91
RFC3P40938 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.13□□□□□ -1.91
RFC3P40938 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.13□□□□□ -1.91
RFC3P40938 MTCYBP41-201ENST00000528913 1123 ntBASIC3.13□□□□□ -1.91
RFC3P40938 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.13□□□□□ -1.91
RFC3P40938 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.13□□□□□ -1.91
RFC3P40938 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.13□□□□□ -1.91
RFC3P40938 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.13□□□□□ -1.91
RFC3P40938 MIR3690-201ENST00000580266 75 ntBASIC3.13□□□□□ -1.91
RFC3P40938 OR4G1P-201ENST00000588632 938 ntBASIC3.13□□□□□ -1.91
RFC3P40938 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.13□□□□□ -1.91
RFC3P40938 IGHV3-29-201ENST00000604817 344 ntBASIC3.13□□□□□ -1.91
RFC3P40938 AL009028.1-201ENST00000604895 802 ntBASIC3.13□□□□□ -1.91
RFC3P40938 KATNBL1P5-201ENST00000605015 517 ntBASIC3.13□□□□□ -1.91
RFC3P40938 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.13□□□□□ -1.91
RFC3P40938 AC107294.3-201ENST00000609211 526 ntBASIC3.13□□□□□ -1.91
RFC3P40938 AC073569.3-201ENST00000619055 682 ntBASIC3.13□□□□□ -1.91
RFC3P40938 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.13□□□□□ -1.91
RFC3P40938 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.13□□□□□ -1.91
RFC3P40938 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.13□□□□□ -1.91
RFC3P40938 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFC3P40938 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.12□□□□□ -1.91
RFC3P40938 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFC3P40938 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.12□□□□□ -1.91
RFC3P40938 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFC3P40938 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFC3P40938 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFC3P40938 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFC3P40938 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RFC3P40938 RNU1-75P-201ENST00000347264 129 ntBASIC3.12□□□□□ -1.91
RFC3P40938 RNU6-283P-201ENST00000364788 107 ntBASIC3.12□□□□□ -1.91
RFC3P40938 RNA5SP235-201ENST00000365411 114 ntBASIC3.12□□□□□ -1.91
RFC3P40938 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RFC3P40938 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.12□□□□□ -1.91
RFC3P40938 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.12□□□□□ -1.91
RFC3P40938 AC008280.1-201ENST00000418851 412 ntBASIC3.12□□□□□ -1.91
RFC3P40938 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.12□□□□□ -1.91
RFC3P40938 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.12□□□□□ -1.91
RFC3P40938 FAR1P1-201ENST00000427163 934 ntBASIC3.12□□□□□ -1.91
RFC3P40938 BX679664.1-201ENST00000434429 253 ntBASIC3.12□□□□□ -1.91
RFC3P40938 AC074367.1-201ENST00000438685 1125 ntBASIC3.12□□□□□ -1.91
RFC3P40938 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.12□□□□□ -1.91
RFC3P40938 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.12□□□□□ -1.91
RFC3P40938 BTF3P5-201ENST00000457252 467 ntBASIC3.12□□□□□ -1.91
RFC3P40938 AC023598.1-201ENST00000472521 361 ntBASIC3.12□□□□□ -1.91
RFC3P40938 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFC3P40938 AC093663.1-201ENST00000497190 394 ntBASIC3.12□□□□□ -1.91
RFC3P40938 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.12□□□□□ -1.91
RFC3P40938 RNF138P1-201ENST00000502765 546 ntBASIC3.12□□□□□ -1.91
RFC3P40938 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.12□□□□□ -1.91
RFC3P40938 RN7SKP244-201ENST00000516513 307 ntBASIC3.12□□□□□ -1.91
RFC3P40938 RNU6-579P-201ENST00000516879 102 ntBASIC3.12□□□□□ -1.91
RFC3P40938 RN7SKP57-201ENST00000517248 293 ntBASIC3.12□□□□□ -1.91
RFC3P40938 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.12□□□□□ -1.91
RFC3P40938 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.12□□□□□ -1.91
RFC3P40938 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.12□□□□□ -1.91
RFC3P40938 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.12□□□□□ -1.91
RFC3P40938 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.12□□□□□ -1.91
RFC3P40938 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.12□□□□□ -1.91
RFC3P40938 OR4H12P-201ENST00000556269 907 ntBASIC3.12□□□□□ -1.91
RFC3P40938 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.12□□□□□ -1.91
RFC3P40938 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.12□□□□□ -1.91
RFC3P40938 AC012254.4-201ENST00000588843 273 ntBASIC3.12□□□□□ -1.91
RFC3P40938 AC067852.3-201ENST00000589177 561 ntBASIC3.12□□□□□ -1.91
RFC3P40938 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.12□□□□□ -1.91
RFC3P40938 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.12□□□□□ -1.91
RFC3P40938 OR4H6P-202ENST00000603819 340 ntBASIC3.12□□□□□ -1.91
RFC3P40938 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms