Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 AC107934.2-201ENST00000518653 310 ntBASIC2.6□□□□□ -1.99
TPRP12270 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC2.6□□□□□ -1.99
TPRP12270 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.6□□□□□ -1.99
TPRP12270 AC141257.3-201ENST00000572906 215 ntBASIC2.6□□□□□ -1.99
TPRP12270 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
TPRP12270 AP000919.1-202ENST00000581139 1264 ntBASIC2.6□□□□□ -1.99
TPRP12270 AC018690.1-201ENST00000608144 626 ntBASIC2.6□□□□□ -1.99
TPRP12270 AC244517.3-201ENST00000616254 1235 ntBASIC2.6□□□□□ -1.99
TPRP12270 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.6□□□□□ -1.99
TPRP12270 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TPRP12270 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
TPRP12270 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
TPRP12270 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC2.6□□□□□ -1.99
TPRP12270 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TPRP12270 RNU1-73P-201ENST00000383971 164 ntBASIC2.6□□□□□ -1.99
TPRP12270 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.6□□□□□ -1.99
TPRP12270 RPS12P2-201ENST00000439728 269 ntBASIC2.6□□□□□ -1.99
TPRP12270 RPS12P18-201ENST00000442381 270 ntBASIC2.6□□□□□ -1.99
TPRP12270 AL162389.1-201ENST00000449233 177 ntBASIC2.6□□□□□ -1.99
TPRP12270 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC2.6□□□□□ -1.99
TPRP12270 AC010198.2-201ENST00000550612 259 ntBASIC2.6□□□□□ -1.99
TPRP12270 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.6□□□□□ -1.99
TPRP12270 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.6□□□□□ -1.99
TPRP12270 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.6□□□□□ -1.99
TPRP12270 AC079228.1-201ENST00000624774 1049 ntBASIC2.6□□□□□ -1.99
TPRP12270 RNU4-44P-201ENST00000363050 141 ntBASIC2.59□□□□□ -1.99
TPRP12270 Z98742.3-201ENST00000418637 326 ntBASIC2.59□□□□□ -1.99
TPRP12270 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.59□□□□□ -1.99
TPRP12270 ETF1P3-201ENST00000430422 1160 ntBASIC2.59□□□□□ -1.99
TPRP12270 AC112653.1-201ENST00000443851 386 ntBASIC2.59□□□□□ -1.99
TPRP12270 AP005136.1-201ENST00000579765 429 ntBASIC2.59□□□□□ -1.99
TPRP12270 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC2.59□□□□□ -1.99
TPRP12270 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.59□□□□□ -1.99
TPRP12270 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
TPRP12270 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
TPRP12270 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TPRP12270 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TPRP12270 AC126124.2-201ENST00000413542 321 ntBASIC2.59□□□□□ -2
TPRP12270 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.59□□□□□ -2
TPRP12270 PRDX3P4-201ENST00000470828 747 ntBASIC2.59□□□□□ -2
TPRP12270 AC068781.1-201ENST00000488231 618 ntBASIC2.59□□□□□ -2
TPRP12270 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.59□□□□□ -2
TPRP12270 OR10D4P-201ENST00000525892 951 ntBASIC2.59□□□□□ -2
TPRP12270 ELOCP31-201ENST00000540463 467 ntBASIC2.59□□□□□ -2
TPRP12270 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.59□□□□□ -2
TPRP12270 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.59□□□□□ -2
TPRP12270 AC068313.1-201ENST00000604028 1008 ntBASIC2.59□□□□□ -2
TPRP12270 AL353684.1-201ENST00000622677 1120 ntBASIC2.59□□□□□ -2
TPRP12270 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.59□□□□□ -2
TPRP12270 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
TPRP12270 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
TPRP12270 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC2.58□□□□□ -2
TPRP12270 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC2.58□□□□□ -2
TPRP12270 AC104297.1-201ENST00000393779 870 ntBASIC2.58□□□□□ -2
TPRP12270 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.58□□□□□ -2
TPRP12270 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
TPRP12270 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.58□□□□□ -2
TPRP12270 RPS6P2-201ENST00000454208 705 ntBASIC2.58□□□□□ -2
TPRP12270 AL590639.1-201ENST00000456484 337 ntBASIC2.58□□□□□ -2
TPRP12270 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.58□□□□□ -2
TPRP12270 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.58□□□□□ -2
TPRP12270 OR4G11P-201ENST00000492842 939 ntBASIC2.58□□□□□ -2
TPRP12270 SUB1P3-201ENST00000564581 315 ntBASIC2.58□□□□□ -2
TPRP12270 AC233280.2-201ENST00000603917 1070 ntBASIC2.58□□□□□ -2
TPRP12270 TTC39DP-201ENST00000416781 1688 ntBASIC2.58□□□□□ -2
TPRP12270 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
TPRP12270 MTND4LP16-201ENST00000440828 295 ntBASIC2.58□□□□□ -2
TPRP12270 AC078817.1-201ENST00000492623 435 ntBASIC2.58□□□□□ -2
TPRP12270 TRAV11-201ENST00000539512 339 ntBASIC2.58□□□□□ -2
TPRP12270 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.58□□□□□ -2
TPRP12270 MIR6779-201ENST00000617283 64 ntBASIC2.58□□□□□ -2
TPRP12270 AL356490.1-201ENST00000623079 479 ntBASIC2.58□□□□□ -2
TPRP12270 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC2.58□□□□□ -2
TPRP12270 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TPRP12270 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
TPRP12270 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TPRP12270 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.57□□□□□ -2
TPRP12270 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.57□□□□□ -2
TPRP12270 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.57□□□□□ -2
TPRP12270 AL365396.1-201ENST00000430854 671 ntBASIC2.57□□□□□ -2
TPRP12270 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.57□□□□□ -2
TPRP12270 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.57□□□□□ -2
TPRP12270 AP000859.1-201ENST00000525536 307 ntBASIC2.57□□□□□ -2
TPRP12270 AP001317.1-201ENST00000531194 960 ntBASIC2.57□□□□□ -2
TPRP12270 AC022882.1-201ENST00000532142 501 ntBASIC2.57□□□□□ -2
TPRP12270 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.57□□□□□ -2
TPRP12270 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.57□□□□□ -2
TPRP12270 AC022884.3-201ENST00000579571 248 ntBASIC2.57□□□□□ -2
TPRP12270 MIR3199-1-201ENST00000582434 88 ntBASIC2.57□□□□□ -2
TPRP12270 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
TPRP12270 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC2.57□□□□□ -2
TPRP12270 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.57□□□□□ -2
TPRP12270 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TPRP12270 AL035425.3-201ENST00000564206 4996 ntBASIC2.57□□□□□ -2
TPRP12270 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.57□□□□□ -2
TPRP12270 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.57□□□□□ -2
TPRP12270 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.57□□□□□ -2
TPRP12270 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
TPRP12270 AP001025.2-201ENST00000490908 477 ntBASIC2.57□□□□□ -2
TPRP12270 AC026412.2-201ENST00000512270 1075 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms