Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL445363.3-201ENST00000623080 671 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AC008013.2-202ENST00000637965 364 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AC079776.5-201ENST00000641920 211 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFAP04085 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.64□□□□□ -1.51
PDGFAP04085 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFAP04085 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.64□□□□□ -1.51
PDGFAP04085 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFAP04085 OR13C1P-202ENST00000641378 2919 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 MFSD8-239ENST00000641590 2479 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFAP04085 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFAP04085 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFAP04085 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFAP04085 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.63□□□□□ -1.51
PDGFAP04085 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFAP04085 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFAP04085 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
PDGFAP04085 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFAP04085 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFAP04085 MTND5P19-201ENST00000424872 1794 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.63□□□□□ -1.51
PDGFAP04085 RNU6-249P-201ENST00000363016 102 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
PDGFAP04085 RNU6-146P-201ENST00000384602 108 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 AL360182.1-201ENST00000397433 468 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 AL139397.2-201ENST00000404529 772 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 RNU4-65P-201ENST00000410473 140 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 RNU6-954P-201ENST00000411355 107 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 RPL21P24-201ENST00000413752 448 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.63□□□□□ -1.51
PDGFAP04085 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.63□□□□□ -1.51
PDGFAP04085 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.63□□□□□ -1.51
PDGFAP04085 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.63□□□□□ -1.51
PDGFAP04085 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.63□□□□□ -1.51
PDGFAP04085 MTND1P17-201ENST00000448961 204 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 AC234775.1-201ENST00000454247 670 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 SCARNA18-201ENST00000459004 134 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 AC116533.1-201ENST00000459748 321 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 AC004453.1-201ENST00000487895 408 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.63□□□□□ -1.51
PDGFAP04085 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.63□□□□□ -1.51
PDGFAP04085 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.63□□□□□ -1.51
PDGFAP04085 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.63□□□□□ -1.51
PDGFAP04085 RNU6-941P-201ENST00000516346 108 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 HMGB1P19-201ENST00000517578 577 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 IGKV2D-36-201ENST00000518643 226 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 AP000648.1-201ENST00000529682 397 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 OR10G5P-201ENST00000532733 358 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 CR383656.7-201ENST00000548164 174 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.63□□□□□ -1.51
PDGFAP04085 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.63□□□□□ -1.51
PDGFAP04085 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.63□□□□□ -1.51
PDGFAP04085 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFAP04085 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFAP04085 COX6CP7-201ENST00000597056 208 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.63□□□□□ -1.51
PDGFAP04085 SDR42E1P1-201ENST00000611327 477 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 CYP4F35P-202ENST00000636121 390 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 AC010266.2-201ENST00000564741 3255 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 AC108751.5-201ENST00000492880 1336 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PDGFAP04085 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PDGFAP04085 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFAP04085 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
PDGFAP04085 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.63□□□□□ -1.51
PDGFAP04085 AC027287.1-201ENST00000553115 1453 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFAP04085 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.63□□□□□ -1.51
PDGFAP04085 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFAP04085 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.63□□□□□ -1.51
PDGFAP04085 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
PDGFAP04085 MAPK10-338ENST00000641647 3362 ntBASIC5.63□□□□□ -1.51
PDGFAP04085 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFAP04085 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.62□□□□□ -1.51
PDGFAP04085 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
PDGFAP04085 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFAP04085 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFAP04085 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PDGFAP04085 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFAP04085 AC116667.1-201ENST00000604855 2072 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFAP04085 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFAP04085 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.62□□□□□ -1.51
PDGFAP04085 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFAP04085 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.62□□□□□ -1.51
PDGFAP04085 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFAP04085 RNU6-1309P-201ENST00000363305 108 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PDGFAP04085 RNU6-601P-201ENST00000384540 107 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.62□□□□□ -1.51
PDGFAP04085 RN7SKP17-201ENST00000411242 351 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 RN7SKP293-201ENST00000411389 296 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 UBE2FP1-201ENST00000416536 447 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 RAC1P6-201ENST00000423911 575 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 AC008065.1-201ENST00000428525 348 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.62□□□□□ -1.51
PDGFAP04085 AL353597.2-202ENST00000434901 373 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms