Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC021205.2-201ENST00000480069 347 ntBASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 AC109471.1-201ENST00000511631 612 ntBASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 AC023632.1-201ENST00000518463 375 ntBASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 DEFB130C-202ENST00000530001 230 ntBASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 PTP4A1P6-201ENST00000531034 478 ntBASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 MIR5047-201ENST00000579212 100 ntBASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 AL158050.2-201ENST00000605336 568 ntBASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 AC090912.3-201ENST00000609775 533 ntBASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 MIR6748-201ENST00000610433 71 ntBASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 AC007496.3-201ENST00000624987 3443 ntBASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 AL355578.1-201ENST00000607405 1328 ntBASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HDHD3Q9BSH5 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 ELL2P4-201ENST00000446870 1376 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 AL359893.1-201ENST00000447628 1580 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 RNU6-582P-201ENST00000362989 107 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 RNU6-251P-201ENST00000363235 104 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 RNU4-51P-201ENST00000364206 140 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 RNU6-444P-201ENST00000383988 108 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 RNU6-921P-201ENST00000384361 107 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 RNU6-441P-201ENST00000384545 106 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 METTL5-204ENST00000409340 472 ntTSL 5 BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 ATP5A1P2-201ENST00000412323 255 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 AC126124.2-201ENST00000413542 321 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 BTF3P8-201ENST00000414577 526 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 TEX41-203ENST00000420472 765 ntTSL 3 BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 AC097262.1-201ENST00000452559 548 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 AC087879.1-201ENST00000474343 374 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 PRELID3BP6-201ENST00000503839 571 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 SNX5P1-201ENST00000505757 1041 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 AC048346.1-201ENST00000510247 144 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 HIGD1AP3-201ENST00000515857 278 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 AC007224.1-201ENST00000564410 144 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 AC011458.1-201ENST00000604034 617 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 AC067959.1-201ENST00000604334 379 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 AC097504.2-201ENST00000608088 454 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 CYCSP41-201ENST00000616920 296 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 AL391262.2-201ENST00000622466 494 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 AC110801.1-201ENST00000623590 212 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 AC098679.5-201ENST00000624394 571 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 AP003485.1-201ENST00000625093 753 ntBASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HDHD3Q9BSH5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HDHD3Q9BSH5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
HDHD3Q9BSH5 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HDHD3Q9BSH5 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
HDHD3Q9BSH5 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HDHD3Q9BSH5 ANKRD36P1-201ENST00000344424 659 ntBASIC2.87□□□□□ -1.95
HDHD3Q9BSH5 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.87□□□□□ -1.95
HDHD3Q9BSH5 MIR153-1-201ENST00000384914 90 ntBASIC2.87□□□□□ -1.95
HDHD3Q9BSH5 GSTA8P-201ENST00000404253 637 ntBASIC2.87□□□□□ -1.95
HDHD3Q9BSH5 RNA5SP107-201ENST00000411358 122 ntBASIC2.87□□□□□ -1.95
HDHD3Q9BSH5 AC093578.1-201ENST00000415219 368 ntBASIC2.87□□□□□ -1.95
HDHD3Q9BSH5 FCF1P2-201ENST00000415284 583 ntBASIC2.87□□□□□ -1.95
HDHD3Q9BSH5 LUZP4P1-201ENST00000415420 344 ntBASIC2.87□□□□□ -1.95
HDHD3Q9BSH5 AL035423.1-201ENST00000420331 213 ntBASIC2.87□□□□□ -1.95
HDHD3Q9BSH5 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.87□□□□□ -1.95
HDHD3Q9BSH5 KCTD10P1-201ENST00000434203 625 ntBASIC2.87□□□□□ -1.95
HDHD3Q9BSH5 AC008264.1-201ENST00000447612 367 ntBASIC2.87□□□□□ -1.95
HDHD3Q9BSH5 TPT1P12-201ENST00000448968 492 ntBASIC2.87□□□□□ -1.95
HDHD3Q9BSH5 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms