Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 AC112198.1-201ENST00000505369 1220 ntBASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 RN7SKP13-201ENST00000515933 244 ntBASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 RNU6-416P-201ENST00000516265 103 ntBASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 RNU1-95P-201ENST00000516357 160 ntBASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 RNU1-128P-201ENST00000516704 160 ntBASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 RN7SKP116-201ENST00000516902 319 ntBASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 TRMT10BP1-201ENST00000519377 943 ntBASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 OR4R3P-201ENST00000525084 838 ntBASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 AP003168.1-201ENST00000530091 307 ntBASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 AP003717.3-201ENST00000544832 1180 ntBASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 AC074029.1-201ENST00000552531 1044 ntBASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 AC095057.3-201ENST00000567102 1157 ntBASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 AC098483.2-201ENST00000603158 454 ntBASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 AC112230.1-201ENST00000604342 547 ntBASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 AC026741.1-201ENST00000605892 482 ntBASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 AC112503.2-201ENST00000609005 552 ntBASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 MIR4496-201ENST00000635896 61 ntBASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CCDC50Q8IVM0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 SNORA31-201ENST00000362607 130 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 RNU6-356P-201ENST00000384140 107 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 SNORD65C-201ENST00000390962 71 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 RNU6ATAC-201ENST00000408749 126 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 RAB9AP3-201ENST00000412737 573 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 AC010881.1-201ENST00000433830 235 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 HMGB3P11-201ENST00000440127 604 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 NPM1P49-201ENST00000448027 714 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 RPL29P29-201ENST00000448725 423 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 RAB9AP1-201ENST00000449393 573 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 AL096803.2-201ENST00000450032 677 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 RPS15AP1-201ENST00000457423 391 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 AC091564.1-201ENST00000464563 479 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 AC078918.1-201ENST00000498515 228 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 FCF1P8-201ENST00000510322 597 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 AC027338.1-201ENST00000514840 825 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 SOD1P3-201ENST00000518682 454 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 AC015917.1-201ENST00000579654 510 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 AL020997.3-201ENST00000602843 359 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 HSPE1P14-201ENST00000605812 302 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 AL034408.1-202ENST00000636088 415 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 AL512283.1-201ENST00000606756 1384 ntBASIC3.51□□□□□ -1.85
CCDC50Q8IVM0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 RNU4-35P-201ENST00000362588 141 ntBASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 SNORA51.12-201ENST00000384448 134 ntBASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 MIR554-201ENST00000384874 96 ntBASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 RNU6-77P-201ENST00000410554 91 ntBASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 RNA5SP344-201ENST00000411081 104 ntBASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 AC073264.1-201ENST00000411508 416 ntBASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 AC006960.1-201ENST00000419980 153 ntBASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 ATP5JP1-201ENST00000431631 322 ntBASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 BX248409.1-201ENST00000455497 255 ntBASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 RN7SL542P-201ENST00000467147 294 ntBASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 RPS4XP6-201ENST00000477670 797 ntBASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 HMGB3P15-201ENST00000507326 574 ntBASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 APOOP4-201ENST00000513530 597 ntBASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 IGJP1-201ENST00000522682 475 ntBASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
CCDC50Q8IVM0 AC055876.1-202ENST00000567053 138 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms