Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PRKDCP78527 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
PRKDCP78527 LINC01355-201ENST00000566551 5444 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC1.91□□□□□ -2.1
PRKDCP78527 OR2AS1P-201ENST00000427827 319 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 RPL30P9-201ENST00000465586 330 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 CYCSP20-201ENST00000473154 315 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 AC104027.1-201ENST00000521887 300 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC1.91□□□□□ -2.1
PRKDCP78527 AC018690.1-201ENST00000608144 626 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC1.91□□□□□ -2.1
PRKDCP78527 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PRKDCP78527 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
PRKDCP78527 RNU6-661P-201ENST00000362409 107 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 RN7SKP44-201ENST00000363602 316 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 RNU6-253P-201ENST00000384730 105 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 RPS29P6-201ENST00000438196 145 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 AP000790.1-201ENST00000528891 737 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.91□□□□□ -2.1
PRKDCP78527 NRBF2P1-201ENST00000587407 859 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 MIR6845-201ENST00000613182 61 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.91□□□□□ -2.1
PRKDCP78527 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC1.91□□□□□ -2.1
PRKDCP78527 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
PRKDCP78527 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
PRKDCP78527 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
PRKDCP78527 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC1.91□□□□□ -2.1
PRKDCP78527 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 CACYBPP2-201ENST00000453625 678 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
PRKDCP78527 MIR2276-201ENST00000516886 89 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 RNU6-295P-201ENST00000516901 104 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 AC245166.1-201ENST00000521012 253 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 AC007424.1-203ENST00000554613 687 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 OR4U1P-201ENST00000554958 912 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC1.91□□□□□ -2.1
PRKDCP78527 RPP40P2-201ENST00000603596 712 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 AL670379.6-201ENST00000603753 252 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 AL670379.11-201ENST00000604059 253 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 AL670379.10-201ENST00000604330 253 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 AC008162.1-201ENST00000604718 254 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 AL670379.1-201ENST00000604752 252 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 AL670379.2-201ENST00000604983 252 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 AL670379.5-201ENST00000605253 252 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 AL670379.4-201ENST00000605279 254 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 AL670379.12-201ENST00000605291 253 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 AL670379.8-201ENST00000605353 252 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 AL670379.9-201ENST00000605428 253 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 AL670379.7-201ENST00000605823 252 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
PRKDCP78527 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
PRKDCP78527 TTC39DP-201ENST00000416781 1688 ntBASIC1.91□□□□□ -2.1
PRKDCP78527 SPATA2P1-201ENST00000431223 2055 ntBASIC1.9□□□□□ -2.1
PRKDCP78527 USP44-208ENST00000552440 1818 ntTSL 5 BASIC1.9□□□□□ -2.1
PRKDCP78527 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.1
PRKDCP78527 RNU1-89P-201ENST00000384592 164 ntBASIC1.9□□□□□ -2.1
PRKDCP78527 RPL32P35-201ENST00000415214 394 ntBASIC1.9□□□□□ -2.1
PRKDCP78527 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.9□□□□□ -2.1
PRKDCP78527 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.1
PRKDCP78527 ISCA1P2-201ENST00000438679 421 ntBASIC1.9□□□□□ -2.1
PRKDCP78527 AC106872.3-201ENST00000495104 446 ntBASIC1.9□□□□□ -2.1
PRKDCP78527 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC1.9□□□□□ -2.1
PRKDCP78527 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.9□□□□□ -2.1
PRKDCP78527 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC1.9□□□□□ -2.1
PRKDCP78527 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
PRKDCP78527 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.1
PRKDCP78527 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
PRKDCP78527 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
PRKDCP78527 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
PRKDCP78527 AL359715.4-201ENST00000606629 1436 ntBASIC1.9□□□□□ -2.1
PRKDCP78527 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
PRKDCP78527 AL049555.1-201ENST00000562834 1933 ntBASIC1.9□□□□□ -2.1
PRKDCP78527 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
PRKDCP78527 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.11
PRKDCP78527 RN7SL636P-201ENST00000497504 294 ntBASIC1.9□□□□□ -2.11
PRKDCP78527 ENSA-210ENST00000503241 574 ntTSL 3 BASIC1.9□□□□□ -2.11
PRKDCP78527 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
PRKDCP78527 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC1.9□□□□□ -2.11
PRKDCP78527 AL109741.3-201ENST00000561748 592 ntBASIC1.9□□□□□ -2.11
PRKDCP78527 AC007423.1-201ENST00000605009 627 ntBASIC1.9□□□□□ -2.11
PRKDCP78527 MIR6779-201ENST00000617283 64 ntBASIC1.9□□□□□ -2.11
PRKDCP78527 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC1.9□□□□□ -2.11
PRKDCP78527 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
PRKDCP78527 RNU6-14P-201ENST00000384630 106 ntBASIC1.9□□□□□ -2.11
PRKDCP78527 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.9□□□□□ -2.11
PRKDCP78527 MTCO1P42-201ENST00000457379 726 ntBASIC1.9□□□□□ -2.11
PRKDCP78527 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC1.9□□□□□ -2.11
PRKDCP78527 RFESD-208ENST00000513950 464 ntTSL 5 BASIC1.9□□□□□ -2.11
PRKDCP78527 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.9□□□□□ -2.11
PRKDCP78527 AC022069.1-201ENST00000582910 658 ntBASIC1.9□□□□□ -2.11
PRKDCP78527 AC010928.3-201ENST00000587712 541 ntBASIC1.9□□□□□ -2.11
PRKDCP78527 AC091903.1-201ENST00000624322 454 ntBASIC1.9□□□□□ -2.11
PRKDCP78527 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
PRKDCP78527 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PRKDCP78527 AL590639.1-201ENST00000456484 337 ntBASIC1.89□□□□□ -2.11
PRKDCP78527 AC108078.3-201ENST00000502633 489 ntBASIC1.89□□□□□ -2.11
PRKDCP78527 MTHFD2P4-201ENST00000515074 1025 ntBASIC1.89□□□□□ -2.11
PRKDCP78527 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PRKDCP78527 AC233280.2-201ENST00000603917 1070 ntBASIC1.89□□□□□ -2.11
PRKDCP78527 AC117529.2-201ENST00000512159 2068 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 199.3 ms