Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 RPL39P36-201ENST00000490784 156 ntBASIC5.52□□□□□ -1.53
RTP1P59025 AC106872.3-201ENST00000495104 446 ntBASIC5.52□□□□□ -1.53
RTP1P59025 AC112204.1-201ENST00000502591 103 ntBASIC5.52□□□□□ -1.53
RTP1P59025 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.52□□□□□ -1.53
RTP1P59025 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.52□□□□□ -1.53
RTP1P59025 HMGN1P13-201ENST00000505795 138 ntBASIC5.52□□□□□ -1.53
RTP1P59025 ENPP7P11-201ENST00000505915 627 ntBASIC5.52□□□□□ -1.53
RTP1P59025 AC025674.1-201ENST00000507074 324 ntBASIC5.52□□□□□ -1.53
RTP1P59025 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RTP1P59025 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.52□□□□□ -1.53
RTP1P59025 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.52□□□□□ -1.53
RTP1P59025 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.52□□□□□ -1.53
RTP1P59025 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.52□□□□□ -1.53
RTP1P59025 AP000790.1-201ENST00000528891 737 ntBASIC5.52□□□□□ -1.53
RTP1P59025 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.52□□□□□ -1.53
RTP1P59025 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.52□□□□□ -1.53
RTP1P59025 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.52□□□□□ -1.53
RTP1P59025 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.52□□□□□ -1.53
RTP1P59025 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.52□□□□□ -1.53
RTP1P59025 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.52□□□□□ -1.53
RTP1P59025 BNIP3P22-201ENST00000593399 556 ntBASIC5.52□□□□□ -1.53
RTP1P59025 AC012507.3-201ENST00000603556 477 ntBASIC5.52□□□□□ -1.53
RTP1P59025 BCRP9-201ENST00000605312 388 ntBASIC5.52□□□□□ -1.53
RTP1P59025 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.52□□□□□ -1.53
RTP1P59025 AC243773.3-201ENST00000613270 256 ntBASIC5.52□□□□□ -1.53
RTP1P59025 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.52□□□□□ -1.53
RTP1P59025 AC009268.2-201ENST00000621925 457 ntBASIC5.52□□□□□ -1.53
RTP1P59025 AC090574.1-201ENST00000623186 233 ntBASIC5.52□□□□□ -1.53
RTP1P59025 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RTP1P59025 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RTP1P59025 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.52□□□□□ -1.53
RTP1P59025 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RTP1P59025 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RTP1P59025 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.52□□□□□ -1.53
RTP1P59025 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RTP1P59025 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RTP1P59025 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.52□□□□□ -1.53
RTP1P59025 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
RTP1P59025 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RTP1P59025 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.52□□□□□ -1.53
RTP1P59025 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
RTP1P59025 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RTP1P59025 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RTP1P59025 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
RTP1P59025 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RTP1P59025 DDX18P4-201ENST00000511690 1966 ntBASIC5.51□□□□□ -1.53
RTP1P59025 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RTP1P59025 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RTP1P59025 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.51□□□□□ -1.53
RTP1P59025 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RTP1P59025 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RTP1P59025 RNU6-251P-201ENST00000363235 104 ntBASIC5.51□□□□□ -1.53
RTP1P59025 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.51□□□□□ -1.53
RTP1P59025 RNU6-729P-201ENST00000384399 107 ntBASIC5.51□□□□□ -1.53
RTP1P59025 MIR129-1-201ENST00000384972 72 ntBASIC5.51□□□□□ -1.53
RTP1P59025 SNORA48.7-201ENST00000391302 135 ntBASIC5.51□□□□□ -1.53
RTP1P59025 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RTP1P59025 AL603766.1-201ENST00000407763 664 ntBASIC5.51□□□□□ -1.53
RTP1P59025 MIR1302-11-201ENST00000408051 138 ntBASIC5.51□□□□□ -1.53
RTP1P59025 MIR1302-9-201ENST00000408365 138 ntBASIC5.51□□□□□ -1.53
RTP1P59025 MIR1302-10-201ENST00000408734 138 ntBASIC5.51□□□□□ -1.53
RTP1P59025 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.51□□□□□ -1.53
RTP1P59025 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.51□□□□□ -1.53
RTP1P59025 SDCBPP2-201ENST00000424643 885 ntBASIC5.51□□□□□ -1.53
RTP1P59025 KCTD9P3-201ENST00000434597 1169 ntBASIC5.51□□□□□ -1.53
RTP1P59025 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.51□□□□□ -1.53
RTP1P59025 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.51□□□□□ -1.53
RTP1P59025 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.51□□□□□ -1.53
RTP1P59025 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.51□□□□□ -1.53
RTP1P59025 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RTP1P59025 SNRPGP6-201ENST00000451124 220 ntBASIC5.51□□□□□ -1.53
RTP1P59025 RPL23AP71-201ENST00000470966 469 ntBASIC5.51□□□□□ -1.53
RTP1P59025 AC073073.1-201ENST00000493920 463 ntBASIC5.51□□□□□ -1.53
RTP1P59025 NIFKP7-201ENST00000503365 834 ntBASIC5.51□□□□□ -1.53
RTP1P59025 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RTP1P59025 RN7SKP283-201ENST00000517197 270 ntBASIC5.51□□□□□ -1.53
RTP1P59025 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.51□□□□□ -1.53
RTP1P59025 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.51□□□□□ -1.53
RTP1P59025 AP003034.1-201ENST00000534621 422 ntBASIC5.51□□□□□ -1.53
RTP1P59025 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.51□□□□□ -1.53
RTP1P59025 HIF1AP1-201ENST00000553642 175 ntBASIC5.51□□□□□ -1.53
RTP1P59025 AL109766.1-201ENST00000555080 552 ntBASIC5.51□□□□□ -1.53
RTP1P59025 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.51□□□□□ -1.53
RTP1P59025 AL845331.3-202ENST00000562856 261 ntBASIC5.51□□□□□ -1.53
RTP1P59025 AL157394.1-201ENST00000562983 1224 ntBASIC5.51□□□□□ -1.53
RTP1P59025 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5.51□□□□□ -1.53
RTP1P59025 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.51□□□□□ -1.53
RTP1P59025 AC245014.2-201ENST00000603689 287 ntBASIC5.51□□□□□ -1.53
RTP1P59025 AC246785.4-201ENST00000605374 287 ntBASIC5.51□□□□□ -1.53
RTP1P59025 AC011816.2-201ENST00000607089 556 ntBASIC5.51□□□□□ -1.53
RTP1P59025 MIR1302-2-201ENST00000607096 138 ntBASIC5.51□□□□□ -1.53
RTP1P59025 Z95327.3-201ENST00000610385 572 ntBASIC5.51□□□□□ -1.53
RTP1P59025 BX005214.3-202ENST00000619809 325 ntBASIC5.51□□□□□ -1.53
RTP1P59025 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
RTP1P59025 AC097461.1-201ENST00000568928 2821 ntBASIC5.51□□□□□ -1.53
RTP1P59025 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.51□□□□□ -1.53
RTP1P59025 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTP1P59025 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.5□□□□□ -1.53
RTP1P59025 ZNF652P1-201ENST00000442420 1309 ntBASIC5.5□□□□□ -1.53
RTP1P59025 AC108751.5-201ENST00000492880 1336 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms