Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 HMGB3P12-201ENST00000438745 556 ntBASIC3.13□□□□□ -1.91
COL4A5P29400 FAM103A2P-201ENST00000444122 354 ntBASIC3.13□□□□□ -1.91
COL4A5P29400 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.13□□□□□ -1.91
COL4A5P29400 AC133473.1-201ENST00000455173 299 ntBASIC3.13□□□□□ -1.91
COL4A5P29400 AC108210.2-201ENST00000503681 201 ntBASIC3.13□□□□□ -1.91
COL4A5P29400 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.13□□□□□ -1.91
COL4A5P29400 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.13□□□□□ -1.91
COL4A5P29400 AC128657.1-201ENST00000549459 145 ntBASIC3.13□□□□□ -1.91
COL4A5P29400 MIR4648-201ENST00000580107 72 ntBASIC3.13□□□□□ -1.91
COL4A5P29400 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.13□□□□□ -1.91
COL4A5P29400 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.13□□□□□ -1.91
COL4A5P29400 AC078899.3-201ENST00000599065 212 ntBASIC3.13□□□□□ -1.91
COL4A5P29400 Y_RNA.4-201ENST00000362333 112 ntBASIC3.12□□□□□ -1.91
COL4A5P29400 RNU4-26P-201ENST00000410270 107 ntBASIC3.12□□□□□ -1.91
COL4A5P29400 RNA5SP425-201ENST00000410336 112 ntBASIC3.12□□□□□ -1.91
COL4A5P29400 RPLP0P7-201ENST00000416050 667 ntBASIC3.12□□□□□ -1.91
COL4A5P29400 AC245291.1-201ENST00000419501 328 ntBASIC3.12□□□□□ -1.91
COL4A5P29400 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.12□□□□□ -1.91
COL4A5P29400 AL591806.2-201ENST00000433122 173 ntBASIC3.12□□□□□ -1.91
COL4A5P29400 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.12□□□□□ -1.91
COL4A5P29400 BNIP3P8-201ENST00000597863 560 ntBASIC3.12□□□□□ -1.91
COL4A5P29400 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.12□□□□□ -1.91
COL4A5P29400 AC099063.3-201ENST00000642066 185 ntBASIC3.12□□□□□ -1.91
COL4A5P29400 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.12□□□□□ -1.91
COL4A5P29400 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
COL4A5P29400 SPATA2P1-201ENST00000431223 2055 ntBASIC3.12□□□□□ -1.91
COL4A5P29400 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.11□□□□□ -1.91
COL4A5P29400 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.11□□□□□ -1.91
COL4A5P29400 AC239798.3-201ENST00000454459 408 ntBASIC3.11□□□□□ -1.91
COL4A5P29400 OR6K1P-201ENST00000456766 971 ntBASIC3.11□□□□□ -1.91
COL4A5P29400 HMGB1P25-201ENST00000468402 607 ntBASIC3.11□□□□□ -1.91
COL4A5P29400 AC093278.1-201ENST00000494700 600 ntBASIC3.11□□□□□ -1.91
COL4A5P29400 RN7SKP24-201ENST00000515888 284 ntBASIC3.11□□□□□ -1.91
COL4A5P29400 IGKV2-36-201ENST00000519999 223 ntBASIC3.11□□□□□ -1.91
COL4A5P29400 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COL4A5P29400 SNORA35B-201ENST00000607417 129 ntBASIC3.11□□□□□ -1.91
COL4A5P29400 AL122125.1-201ENST00000616999 600 ntBASIC3.11□□□□□ -1.91
COL4A5P29400 AC010338.1-201ENST00000621823 717 ntBASIC3.11□□□□□ -1.91
COL4A5P29400 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.11□□□□□ -1.91
COL4A5P29400 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
COL4A5P29400 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COL4A5P29400 MIR27B-201ENST00000385129 97 ntBASIC3.11□□□□□ -1.91
COL4A5P29400 NANOGP5-201ENST00000424456 877 ntBASIC3.11□□□□□ -1.91
COL4A5P29400 AC106901.1-201ENST00000425086 698 ntBASIC3.11□□□□□ -1.91
COL4A5P29400 OR2B8P-201ENST00000432841 938 ntBASIC3.11□□□□□ -1.91
COL4A5P29400 AC016687.1-201ENST00000482574 353 ntBASIC3.11□□□□□ -1.91
COL4A5P29400 PRELID3BP7-201ENST00000503606 469 ntBASIC3.11□□□□□ -1.91
COL4A5P29400 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.11□□□□□ -1.91
COL4A5P29400 AC009977.1-201ENST00000586015 570 ntBASIC3.11□□□□□ -1.91
COL4A5P29400 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL4A5P29400 AC010809.3-201ENST00000621310 641 ntBASIC3.11□□□□□ -1.91
COL4A5P29400 AC079228.1-201ENST00000624774 1049 ntBASIC3.11□□□□□ -1.91
COL4A5P29400 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.1□□□□□ -1.91
COL4A5P29400 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC3.1□□□□□ -1.91
COL4A5P29400 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL4A5P29400 RNA5SP383-201ENST00000362934 120 ntBASIC3.1□□□□□ -1.91
COL4A5P29400 RN7SKP285-201ENST00000410137 318 ntBASIC3.1□□□□□ -1.91
COL4A5P29400 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.1□□□□□ -1.91
COL4A5P29400 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.1□□□□□ -1.91
COL4A5P29400 AC100870.1-201ENST00000522035 505 ntBASIC3.1□□□□□ -1.91
COL4A5P29400 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.1□□□□□ -1.91
COL4A5P29400 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.1□□□□□ -1.91
COL4A5P29400 AL020991.1-201ENST00000612314 373 ntBASIC3.1□□□□□ -1.91
COL4A5P29400 AC008121.2-201ENST00000614647 523 ntBASIC3.1□□□□□ -1.91
COL4A5P29400 AC103798.2-201ENST00000624292 632 ntBASIC3.1□□□□□ -1.91
COL4A5P29400 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
COL4A5P29400 AC093831.2-201ENST00000624393 3427 ntBASIC3.1□□□□□ -1.91
COL4A5P29400 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.1□□□□□ -1.91
COL4A5P29400 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
COL4A5P29400 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
COL4A5P29400 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.09□□□□□ -1.91
COL4A5P29400 AC013268.2-201ENST00000420753 337 ntBASIC3.09□□□□□ -1.91
COL4A5P29400 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
COL4A5P29400 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.09□□□□□ -1.91
COL4A5P29400 AL512643.1-201ENST00000635735 524 ntBASIC3.09□□□□□ -1.91
COL4A5P29400 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
COL4A5P29400 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.92
COL4A5P29400 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
COL4A5P29400 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
COL4A5P29400 AC093775.1-201ENST00000624154 1868 ntBASIC3.08□□□□□ -1.92
COL4A5P29400 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COL4A5P29400 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
COL4A5P29400 AL355379.1-201ENST00000405542 640 ntBASIC3.08□□□□□ -1.92
COL4A5P29400 AL451074.5-201ENST00000415894 435 ntBASIC3.08□□□□□ -1.92
COL4A5P29400 PTP4A1P1-201ENST00000420539 515 ntBASIC3.08□□□□□ -1.92
COL4A5P29400 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.08□□□□□ -1.92
COL4A5P29400 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.08□□□□□ -1.92
COL4A5P29400 RN7SL636P-201ENST00000497504 294 ntBASIC3.08□□□□□ -1.92
COL4A5P29400 AC234781.5-201ENST00000508429 271 ntBASIC3.08□□□□□ -1.92
COL4A5P29400 SEC11B-201ENST00000518383 499 ntBASIC3.08□□□□□ -1.92
COL4A5P29400 AC008277.2-201ENST00000605196 797 ntBASIC3.08□□□□□ -1.92
COL4A5P29400 AC103810.6-201ENST00000606708 136 ntBASIC3.08□□□□□ -1.92
COL4A5P29400 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COL4A5P29400 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
COL4A5P29400 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
COL4A5P29400 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COL4A5P29400 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
COL4A5P29400 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COL4A5P29400 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.08□□□□□ -1.92
COL4A5P29400 PWAR6-201ENST00000552334 4618 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms