Protein–RNA interactions for Protein: P20929

NEB, Nebulin, humanhuman

Predictions only

Length 6,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEBP20929 RNU6-859P-201ENST00000362728 107 ntBASIC1.16□□□□□ -2.22
NEBP20929 AP000275.1-201ENST00000411943 390 ntBASIC1.16□□□□□ -2.22
NEBP20929 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
NEBP20929 MTND2P9-201ENST00000422293 931 ntBASIC1.16□□□□□ -2.22
NEBP20929 NANOGP6-201ENST00000429190 847 ntBASIC1.16□□□□□ -2.22
NEBP20929 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.16□□□□□ -2.22
NEBP20929 RFPL4AP3-201ENST00000515267 345 ntBASIC1.16□□□□□ -2.22
NEBP20929 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.16□□□□□ -2.22
NEBP20929 MIR4301-201ENST00000577203 66 ntBASIC1.16□□□□□ -2.22
NEBP20929 AP001267.4-201ENST00000602598 545 ntBASIC1.16□□□□□ -2.22
NEBP20929 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC1.16□□□□□ -2.22
NEBP20929 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
NEBP20929 HSPD1P14-201ENST00000432666 1618 ntBASIC1.16□□□□□ -2.22
NEBP20929 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
NEBP20929 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
NEBP20929 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
NEBP20929 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.15□□□□□ -2.22
NEBP20929 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC1.15□□□□□ -2.22
NEBP20929 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC1.15□□□□□ -2.22
NEBP20929 RNU4ATAC18P-201ENST00000516179 126 ntBASIC1.15□□□□□ -2.22
NEBP20929 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC1.15□□□□□ -2.22
NEBP20929 AC103810.6-201ENST00000606708 136 ntBASIC1.15□□□□□ -2.22
NEBP20929 AC009318.2-201ENST00000610917 651 ntBASIC1.15□□□□□ -2.22
NEBP20929 AL162574.2-201ENST00000614618 657 ntBASIC1.15□□□□□ -2.22
NEBP20929 AC016542.2-201ENST00000624201 619 ntBASIC1.15□□□□□ -2.22
NEBP20929 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC1.15□□□□□ -2.22
NEBP20929 AC025263.3-201ENST00000622965 1396 ntBASIC1.15□□□□□ -2.22
NEBP20929 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
NEBP20929 AC087565.3-202ENST00000642085 1603 ntBASIC1.15□□□□□ -2.22
NEBP20929 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
NEBP20929 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.15□□□□□ -2.22
NEBP20929 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
NEBP20929 Y_RNA.324-201ENST00000365165 102 ntBASIC1.15□□□□□ -2.23
NEBP20929 U3.42-201ENST00000408746 214 ntBASIC1.15□□□□□ -2.23
NEBP20929 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC1.15□□□□□ -2.23
NEBP20929 RPS4XP22-201ENST00000480755 780 ntBASIC1.15□□□□□ -2.23
NEBP20929 AP002748.2-201ENST00000528671 348 ntBASIC1.15□□□□□ -2.23
NEBP20929 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC1.15□□□□□ -2.23
NEBP20929 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC1.15□□□□□ -2.23
NEBP20929 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
NEBP20929 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
NEBP20929 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
NEBP20929 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
NEBP20929 AC093775.1-201ENST00000624154 1868 ntBASIC1.15□□□□□ -2.23
NEBP20929 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
NEBP20929 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
NEBP20929 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
NEBP20929 DPH3P2-201ENST00000422618 250 ntBASIC1.15□□□□□ -2.23
NEBP20929 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC1.15□□□□□ -2.23
NEBP20929 AL035551.1-201ENST00000446931 348 ntBASIC1.15□□□□□ -2.23
NEBP20929 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC1.15□□□□□ -2.23
NEBP20929 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC1.15□□□□□ -2.23
NEBP20929 AC110588.1-201ENST00000559699 137 ntBASIC1.15□□□□□ -2.23
NEBP20929 AC006840.1-201ENST00000623069 542 ntBASIC1.15□□□□□ -2.23
NEBP20929 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
NEBP20929 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
NEBP20929 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC1.15□□□□□ -2.23
NEBP20929 AC017002.4-201ENST00000604721 1525 ntBASIC1.15□□□□□ -2.23
NEBP20929 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC1.15□□□□□ -2.23
NEBP20929 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.15□□□□□ -2.23
NEBP20929 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC1.15□□□□□ -2.23
NEBP20929 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.15□□□□□ -2.23
NEBP20929 AC108860.1-201ENST00000484521 383 ntBASIC1.15□□□□□ -2.23
NEBP20929 AP003102.1-201ENST00000525638 661 ntBASIC1.15□□□□□ -2.23
NEBP20929 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
NEBP20929 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
NEBP20929 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
NEBP20929 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
NEBP20929 PNPT1P2-201ENST00000456768 2050 ntBASIC1.15□□□□□ -2.23
NEBP20929 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
NEBP20929 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
NEBP20929 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
NEBP20929 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
NEBP20929 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
NEBP20929 RNA5SP457-201ENST00000363657 124 ntBASIC1.15□□□□□ -2.23
NEBP20929 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
NEBP20929 AC112220.1-201ENST00000434628 355 ntBASIC1.15□□□□□ -2.23
NEBP20929 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC1.15□□□□□ -2.23
NEBP20929 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
NEBP20929 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.23
NEBP20929 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
NEBP20929 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
NEBP20929 SNORA26.9-201ENST00000391322 122 ntBASIC1.14□□□□□ -2.23
NEBP20929 AL512633.1-201ENST00000399931 655 ntBASIC1.14□□□□□ -2.23
NEBP20929 DUTP6-201ENST00000425573 462 ntBASIC1.14□□□□□ -2.23
NEBP20929 RPL37P4-201ENST00000448908 268 ntBASIC1.14□□□□□ -2.23
NEBP20929 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC1.14□□□□□ -2.23
NEBP20929 MTCO3P20-201ENST00000454926 688 ntBASIC1.14□□□□□ -2.23
NEBP20929 AP001804.3-201ENST00000525146 880 ntBASIC1.14□□□□□ -2.23
NEBP20929 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.14□□□□□ -2.23
NEBP20929 AL133247.2-201ENST00000603236 482 ntBASIC1.14□□□□□ -2.23
NEBP20929 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
NEBP20929 AC100821.1-201ENST00000523153 2479 ntBASIC1.14□□□□□ -2.23
NEBP20929 AC017007.4-201ENST00000503353 1352 ntBASIC1.14□□□□□ -2.23
NEBP20929 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
NEBP20929 RNA5SP139-201ENST00000364340 117 ntBASIC1.14□□□□□ -2.23
NEBP20929 RNU6-851P-201ENST00000384565 107 ntBASIC1.14□□□□□ -2.23
NEBP20929 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
NEBP20929 AL138878.1-201ENST00000405131 347 ntBASIC1.14□□□□□ -2.23
NEBP20929 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms