Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.34□□□□□ -1.87
CLDN9O95484 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.34□□□□□ -1.87
CLDN9O95484 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.34□□□□□ -1.87
CLDN9O95484 RN7SKP244-201ENST00000516513 307 ntBASIC3.34□□□□□ -1.87
CLDN9O95484 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.34□□□□□ -1.87
CLDN9O95484 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.34□□□□□ -1.87
CLDN9O95484 NDUFB9P3-201ENST00000521269 501 ntBASIC3.34□□□□□ -1.87
CLDN9O95484 PDCL2P2-201ENST00000533651 189 ntBASIC3.34□□□□□ -1.87
CLDN9O95484 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.34□□□□□ -1.87
CLDN9O95484 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.34□□□□□ -1.87
CLDN9O95484 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.34□□□□□ -1.87
CLDN9O95484 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.34□□□□□ -1.87
CLDN9O95484 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.34□□□□□ -1.87
CLDN9O95484 AC048347.1-201ENST00000624621 427 ntBASIC3.34□□□□□ -1.87
CLDN9O95484 AC097372.4-201ENST00000625025 466 ntBASIC3.34□□□□□ -1.87
CLDN9O95484 AL512283.1-201ENST00000606756 1384 ntBASIC3.34□□□□□ -1.88
CLDN9O95484 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CLDN9O95484 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CLDN9O95484 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CLDN9O95484 AL021368.2-201ENST00000606125 5352 ntBASIC3.34□□□□□ -1.88
CLDN9O95484 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
CLDN9O95484 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN9O95484 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN9O95484 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN9O95484 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN9O95484 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN9O95484 AL121972.1-201ENST00000402023 252 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 RNU6ATAC-201ENST00000408749 126 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.33□□□□□ -1.88
CLDN9O95484 OR51A3P-201ENST00000413596 924 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN9O95484 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN9O95484 RPL23AP82-202ENST00000427528 469 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 MTATP6P11-201ENST00000428071 670 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 AL035246.1-201ENST00000433554 1255 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 AC002542.1-201ENST00000440683 193 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CLDN9O95484 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN9O95484 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.33□□□□□ -1.88
CLDN9O95484 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN9O95484 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN9O95484 RPS4XP2-201ENST00000458402 793 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 AC008379.1-201ENST00000463655 464 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 CENPBD1P1-201ENST00000464061 469 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.33□□□□□ -1.88
CLDN9O95484 SNRPGP3-201ENST00000469405 227 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 AC087312.1-201ENST00000471411 480 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 RPL31P13-201ENST00000484151 370 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN9O95484 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN9O95484 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.33□□□□□ -1.88
CLDN9O95484 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.33□□□□□ -1.88
CLDN9O95484 MTND2P31-201ENST00000512602 616 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN9O95484 RNU1-95P-201ENST00000516357 160 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 RNU1-128P-201ENST00000516704 160 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 RN7SKP116-201ENST00000516902 319 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN9O95484 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN9O95484 AC011602.1-201ENST00000546484 331 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN9O95484 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN9O95484 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN9O95484 AC006557.5-201ENST00000603126 811 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 AC005776.1-201ENST00000603164 290 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 AC008739.3-201ENST00000603262 127 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 AC113368.1-201ENST00000603736 382 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 AC025588.3-201ENST00000604182 274 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN9O95484 AC012442.3-202ENST00000636742 206 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CLDN9O95484 AL355578.1-201ENST00000607405 1328 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN9O95484 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN9O95484 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
CLDN9O95484 ZNF734P-201ENST00000419494 1534 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CLDN9O95484 ZNF849P-201ENST00000594711 1566 ntBASIC3.33□□□□□ -1.88
CLDN9O95484 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 SNORA73.2-201ENST00000364946 201 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN9O95484 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CLDN9O95484 MIR483-201ENST00000385070 76 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 PTMAP2-201ENST00000397627 327 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CLDN9O95484 RAB9AP3-201ENST00000412737 573 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN9O95484 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN9O95484 AC069157.1-201ENST00000421749 137 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN9O95484 DEFB130D-201ENST00000426866 237 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 AC018644.1-201ENST00000429934 551 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN9O95484 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN9O95484 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN9O95484 AC008264.1-201ENST00000447612 367 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 RAB9AP1-201ENST00000449393 573 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN9O95484 HMGN3P1-201ENST00000453847 193 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 CFTRP1-201ENST00000456646 183 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms