Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 MSL3P1-202ENST00000440028 1468 ntBASIC6.83□□□□□ -1.32
RNF40O75150 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF40O75150 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.83□□□□□ -1.32
RNF40O75150 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF40O75150 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.82□□□□□ -1.32
RNF40O75150 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.82□□□□□ -1.32
RNF40O75150 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF40O75150 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF40O75150 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF40O75150 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF40O75150 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RNF40O75150 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.82□□□□□ -1.32
RNF40O75150 CASC19-228ENST00000641414 1684 ntBASIC6.82□□□□□ -1.32
RNF40O75150 RNU4-50P-201ENST00000364361 141 ntBASIC6.82□□□□□ -1.32
RNF40O75150 Y_RNA.526-201ENST00000384572 110 ntBASIC6.82□□□□□ -1.32
RNF40O75150 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.82□□□□□ -1.32
RNF40O75150 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.82□□□□□ -1.32
RNF40O75150 AL445928.1-201ENST00000435545 222 ntBASIC6.82□□□□□ -1.32
RNF40O75150 EIF5AP4-201ENST00000441206 465 ntBASIC6.82□□□□□ -1.32
RNF40O75150 RNU7-59P-201ENST00000459101 61 ntBASIC6.82□□□□□ -1.32
RNF40O75150 AP001992.1-205ENST00000462248 379 ntBASIC6.82□□□□□ -1.32
RNF40O75150 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
RNF40O75150 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RNF40O75150 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.82□□□□□ -1.32
RNF40O75150 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.82□□□□□ -1.32
RNF40O75150 SNORA74.1-201ENST00000516320 180 ntBASIC6.82□□□□□ -1.32
RNF40O75150 RN7SKP147-201ENST00000517154 244 ntBASIC6.82□□□□□ -1.32
RNF40O75150 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.82□□□□□ -1.32
RNF40O75150 FAM60DP-201ENST00000524174 632 ntBASIC6.82□□□□□ -1.32
RNF40O75150 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.82□□□□□ -1.32
RNF40O75150 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.82□□□□□ -1.32
RNF40O75150 AC073916.1-201ENST00000545095 130 ntBASIC6.82□□□□□ -1.32
RNF40O75150 AC026371.1-201ENST00000551867 419 ntBASIC6.82□□□□□ -1.32
RNF40O75150 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.82□□□□□ -1.32
RNF40O75150 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.82□□□□□ -1.32
RNF40O75150 AC026956.1-201ENST00000558741 396 ntBASIC6.82□□□□□ -1.32
RNF40O75150 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.82□□□□□ -1.32
RNF40O75150 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC6.82□□□□□ -1.32
RNF40O75150 AC006600.1-201ENST00000572529 153 ntBASIC6.82□□□□□ -1.32
RNF40O75150 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC6.82□□□□□ -1.32
RNF40O75150 AC008521.1-201ENST00000587471 187 ntBASIC6.82□□□□□ -1.32
RNF40O75150 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.82□□□□□ -1.32
RNF40O75150 AC004832.4-201ENST00000608952 331 ntBASIC6.82□□□□□ -1.32
RNF40O75150 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.82□□□□□ -1.32
RNF40O75150 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.82□□□□□ -1.32
RNF40O75150 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF40O75150 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF40O75150 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RNF40O75150 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
RNF40O75150 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF40O75150 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF40O75150 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RNF40O75150 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF40O75150 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF40O75150 AC010624.4-201ENST00000597606 1351 ntBASIC6.82□□□□□ -1.32
RNF40O75150 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
RNF40O75150 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.82□□□□□ -1.32
RNF40O75150 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.81□□□□□ -1.32
RNF40O75150 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.81□□□□□ -1.32
RNF40O75150 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.81□□□□□ -1.32
RNF40O75150 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RNF40O75150 AC062022.1-201ENST00000451026 1684 ntBASIC6.81□□□□□ -1.32
RNF40O75150 ZNF33CP-201ENST00000432492 2030 ntBASIC6.81□□□□□ -1.32
RNF40O75150 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RNF40O75150 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.81□□□□□ -1.32
RNF40O75150 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
RNF40O75150 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
RNF40O75150 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RNF40O75150 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RNF40O75150 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RNF40O75150 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.81□□□□□ -1.32
RNF40O75150 Y_RNA.352-201ENST00000365439 102 ntBASIC6.81□□□□□ -1.32
RNF40O75150 RNU6-81P-201ENST00000365608 104 ntBASIC6.81□□□□□ -1.32
RNF40O75150 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
RNF40O75150 RNY1P5-201ENST00000383890 115 ntBASIC6.81□□□□□ -1.32
RNF40O75150 RNU1-46P-201ENST00000384425 164 ntBASIC6.81□□□□□ -1.32
RNF40O75150 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
RNF40O75150 SNORD70.1-201ENST00000391007 85 ntBASIC6.81□□□□□ -1.32
RNF40O75150 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.81□□□□□ -1.32
RNF40O75150 HMGA1P8-201ENST00000414130 321 ntBASIC6.81□□□□□ -1.32
RNF40O75150 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.81□□□□□ -1.32
RNF40O75150 RPL21P109-201ENST00000422213 475 ntBASIC6.81□□□□□ -1.32
RNF40O75150 FAR2P4-202ENST00000425399 584 ntBASIC6.81□□□□□ -1.32
RNF40O75150 AC097713.2-201ENST00000430199 356 ntBASIC6.81□□□□□ -1.32
RNF40O75150 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RNF40O75150 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.81□□□□□ -1.32
RNF40O75150 Y_RNA.644-201ENST00000459006 113 ntBASIC6.81□□□□□ -1.32
RNF40O75150 RN7SL552P-201ENST00000462094 276 ntBASIC6.81□□□□□ -1.32
RNF40O75150 RPL17P19-201ENST00000489069 552 ntBASIC6.81□□□□□ -1.32
RNF40O75150 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.81□□□□□ -1.32
RNF40O75150 SNX18P24-201ENST00000505249 671 ntBASIC6.81□□□□□ -1.32
RNF40O75150 AC108078.2-201ENST00000510750 236 ntBASIC6.81□□□□□ -1.32
RNF40O75150 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.81□□□□□ -1.32
RNF40O75150 Y_RNA.674-201ENST00000516362 113 ntBASIC6.81□□□□□ -1.32
RNF40O75150 RNU6-323P-201ENST00000521915 107 ntBASIC6.81□□□□□ -1.32
RNF40O75150 AC115085.1-201ENST00000588924 229 ntBASIC6.81□□□□□ -1.32
RNF40O75150 MZT1P2-201ENST00000604387 248 ntBASIC6.81□□□□□ -1.32
RNF40O75150 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC6.81□□□□□ -1.32
RNF40O75150 AC015982.1-201ENST00000608113 465 ntBASIC6.81□□□□□ -1.32
RNF40O75150 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms