Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.57□□□□□ -1.68
PROM1O43490 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.57□□□□□ -1.68
PROM1O43490 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.57□□□□□ -1.68
PROM1O43490 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.57□□□□□ -1.68
PROM1O43490 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.57□□□□□ -1.68
PROM1O43490 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.57□□□□□ -1.68
PROM1O43490 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.57□□□□□ -1.68
PROM1O43490 AC234771.5-201ENST00000600161 514 ntBASIC4.57□□□□□ -1.68
PROM1O43490 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.57□□□□□ -1.68
PROM1O43490 AC008745.1-201ENST00000604064 271 ntBASIC4.57□□□□□ -1.68
PROM1O43490 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.57□□□□□ -1.68
PROM1O43490 AC090578.1-201ENST00000604955 591 ntBASIC4.57□□□□□ -1.68
PROM1O43490 AC097468.3-201ENST00000607956 456 ntBASIC4.57□□□□□ -1.68
PROM1O43490 AC072046.2-201ENST00000618366 268 ntBASIC4.57□□□□□ -1.68
PROM1O43490 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PROM1O43490 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.57□□□□□ -1.68
PROM1O43490 AC090229.1-201ENST00000590983 1609 ntBASIC4.57□□□□□ -1.68
PROM1O43490 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PROM1O43490 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PROM1O43490 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.56□□□□□ -1.68
PROM1O43490 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PROM1O43490 AC107068.1-201ENST00000563286 4218 ntBASIC4.56□□□□□ -1.68
PROM1O43490 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.56□□□□□ -1.68
PROM1O43490 LINC00561-201ENST00000565815 2738 ntBASIC4.56□□□□□ -1.68
PROM1O43490 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PROM1O43490 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PROM1O43490 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PROM1O43490 Y_RNA.296-201ENST00000364930 108 ntBASIC4.56□□□□□ -1.68
PROM1O43490 Y_RNA.390-201ENST00000383932 102 ntBASIC4.56□□□□□ -1.68
PROM1O43490 RNU6-533P-201ENST00000384144 107 ntBASIC4.56□□□□□ -1.68
PROM1O43490 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.56□□□□□ -1.68
PROM1O43490 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.56□□□□□ -1.68
PROM1O43490 MIR320C1-201ENST00000408566 88 ntBASIC4.56□□□□□ -1.68
PROM1O43490 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PROM1O43490 CYCSP10-201ENST00000417973 294 ntBASIC4.56□□□□□ -1.68
PROM1O43490 RPL7P30-201ENST00000420888 709 ntBASIC4.56□□□□□ -1.68
PROM1O43490 AL645608.4-201ENST00000423619 154 ntBASIC4.56□□□□□ -1.68
PROM1O43490 CKS1BP6-201ENST00000424932 240 ntBASIC4.56□□□□□ -1.68
PROM1O43490 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.56□□□□□ -1.68
PROM1O43490 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.56□□□□□ -1.68
PROM1O43490 NPM1P34-201ENST00000428821 893 ntBASIC4.56□□□□□ -1.68
PROM1O43490 AC023347.2-201ENST00000433994 462 ntBASIC4.56□□□□□ -1.68
PROM1O43490 MTND4LP10-201ENST00000435146 291 ntBASIC4.56□□□□□ -1.68
PROM1O43490 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.56□□□□□ -1.68
PROM1O43490 AC011753.3-201ENST00000443436 406 ntBASIC4.56□□□□□ -1.68
PROM1O43490 GDI2P2-201ENST00000445131 608 ntBASIC4.56□□□□□ -1.68
PROM1O43490 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.56□□□□□ -1.68
PROM1O43490 MRPL48P1-201ENST00000445390 636 ntBASIC4.56□□□□□ -1.68
PROM1O43490 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.56□□□□□ -1.68
PROM1O43490 RPL39P6-201ENST00000448289 150 ntBASIC4.56□□□□□ -1.68
PROM1O43490 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.56□□□□□ -1.68
PROM1O43490 AL590365.1-201ENST00000450788 243 ntBASIC4.56□□□□□ -1.68
PROM1O43490 AURKAPS2-201ENST00000454983 333 ntBASIC4.56□□□□□ -1.68
PROM1O43490 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.56□□□□□ -1.68
PROM1O43490 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.56□□□□□ -1.68
PROM1O43490 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.56□□□□□ -1.68
PROM1O43490 IGLV2-34-201ENST00000490007 283 ntBASIC4.56□□□□□ -1.68
PROM1O43490 FCF1P3-201ENST00000496394 590 ntBASIC4.56□□□□□ -1.68
PROM1O43490 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.56□□□□□ -1.68
PROM1O43490 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.56□□□□□ -1.68
PROM1O43490 KLRA1P-201ENST00000503499 986 ntBASIC4.56□□□□□ -1.68
PROM1O43490 POU5F1P7-201ENST00000508759 541 ntBASIC4.56□□□□□ -1.68
PROM1O43490 AC093824.1-201ENST00000508796 343 ntBASIC4.56□□□□□ -1.68
PROM1O43490 AC093809.1-201ENST00000509155 340 ntBASIC4.56□□□□□ -1.68
PROM1O43490 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.56□□□□□ -1.68
PROM1O43490 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PROM1O43490 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.56□□□□□ -1.68
PROM1O43490 AC021006.3-201ENST00000530771 192 ntBASIC4.56□□□□□ -1.68
PROM1O43490 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.56□□□□□ -1.68
PROM1O43490 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PROM1O43490 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.56□□□□□ -1.68
PROM1O43490 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PROM1O43490 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.56□□□□□ -1.68
PROM1O43490 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.56□□□□□ -1.68
PROM1O43490 AC012417.1-201ENST00000582307 1039 ntBASIC4.56□□□□□ -1.68
PROM1O43490 HMGB2P1-201ENST00000591146 634 ntBASIC4.56□□□□□ -1.68
PROM1O43490 AL133338.2-201ENST00000604292 736 ntBASIC4.56□□□□□ -1.68
PROM1O43490 AP002360.3-201ENST00000607673 710 ntBASIC4.56□□□□□ -1.68
PROM1O43490 AC103710.1-201ENST00000610003 901 ntBASIC4.56□□□□□ -1.68
PROM1O43490 AP001506.1-201ENST00000615444 211 ntBASIC4.56□□□□□ -1.68
PROM1O43490 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.56□□□□□ -1.68
PROM1O43490 AC087385.3-201ENST00000620477 187 ntBASIC4.56□□□□□ -1.68
PROM1O43490 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PROM1O43490 TLK1P1-201ENST00000456760 2440 ntBASIC4.56□□□□□ -1.68
PROM1O43490 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PROM1O43490 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.56□□□□□ -1.68
PROM1O43490 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.56□□□□□ -1.68
PROM1O43490 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PROM1O43490 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.56□□□□□ -1.68
PROM1O43490 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
PROM1O43490 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.55□□□□□ -1.68
PROM1O43490 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.55□□□□□ -1.68
PROM1O43490 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PROM1O43490 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PROM1O43490 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PROM1O43490 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PROM1O43490 RNU1-32P-201ENST00000363937 159 ntBASIC4.55□□□□□ -1.68
PROM1O43490 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
PROM1O43490 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.55□□□□□ -1.68
PROM1O43490 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 241.1 ms