Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 RPS26P4-201ENST00000431743 355 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 RPL23AP15-201ENST00000450202 459 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 NPM1P17-201ENST00000479221 602 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 EIF1P6-201ENST00000600054 334 ntBASIC1.21□□□□□ -2.22
MACF1Q9UPN3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
MACF1Q9UPN3 SNRPEP3-201ENST00000338402 276 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC119618.1-201ENST00000434191 222 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC096638.1-201ENST00000444678 216 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 FAM92A1P2-202ENST00000504766 877 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC010620.2-201ENST00000600135 313 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 DPH3P2-201ENST00000422618 250 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 MTCO3P16-201ENST00000454456 754 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC084357.1-201ENST00000473404 255 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 OR10D4P-201ENST00000525892 951 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 CYCSP28-201ENST00000534284 321 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AL078603.1-201ENST00000603824 313 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 BRDTP1-201ENST00000605735 677 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC087588.2-201ENST00000617667 426 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 MIR6734-201ENST00000621166 68 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 RPL31P2-201ENST00000413849 377 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 CENPCP1-201ENST00000533085 2578 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 CUL1P1-201ENST00000509510 2425 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC121333.1-201ENST00000567488 2709 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC098824.1-201ENST00000453565 980 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC022069.1-201ENST00000582910 658 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AL136981.2-201ENST00000617319 734 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC009812.4-201ENST00000569134 1805 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AP001148.1-201ENST00000624124 2359 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 RNU6-457P-201ENST00000363999 107 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 RNA5SP270-201ENST00000411361 118 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 CYCSP49-201ENST00000420810 319 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 DUTP6-201ENST00000425573 462 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC013410.1-201ENST00000436223 1232 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 RPS15AP17-201ENST00000470598 390 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AL163540.1-201ENST00000485382 386 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC107032.1-201ENST00000485945 480 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 OR5BN1P-201ENST00000532955 829 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC128687.1-201ENST00000605304 619 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC026523.2-201ENST00000625039 7739 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AC110774.1-201ENST00000623567 2018 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 OSBPL9P4-201ENST00000371707 1800 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 MTND2P29-201ENST00000438595 412 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 RPS12P2-201ENST00000439728 269 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 RPS12P18-201ENST00000442381 270 ntBASIC1.2□□□□□ -2.22
MACF1Q9UPN3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC1.2□□□□□ -2.22
MACF1Q9UPN3 RN7SL585P-201ENST00000470538 280 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms