Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SCN11AQ9UI33 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
SCN11AQ9UI33 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.47□□□□□ -1.85
SCN11AQ9UI33 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SCN11AQ9UI33 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.47□□□□□ -1.85
SCN11AQ9UI33 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.47□□□□□ -1.85
SCN11AQ9UI33 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.47□□□□□ -1.85
SCN11AQ9UI33 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.47□□□□□ -1.85
SCN11AQ9UI33 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.47□□□□□ -1.85
SCN11AQ9UI33 AC098826.3-201ENST00000603823 466 ntBASIC3.47□□□□□ -1.85
SCN11AQ9UI33 AP003499.2-201ENST00000624100 483 ntBASIC3.47□□□□□ -1.85
SCN11AQ9UI33 AL606537.1-201ENST00000607258 2011 ntBASIC3.47□□□□□ -1.85
SCN11AQ9UI33 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SCN11AQ9UI33 AC109315.1-201ENST00000584143 1347 ntBASIC3.46□□□□□ -1.86
SCN11AQ9UI33 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.46□□□□□ -1.86
SCN11AQ9UI33 CBX1P4-201ENST00000439415 457 ntBASIC3.46□□□□□ -1.86
SCN11AQ9UI33 RN7SL330P-201ENST00000469709 307 ntBASIC3.46□□□□□ -1.86
SCN11AQ9UI33 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.46□□□□□ -1.86
SCN11AQ9UI33 RNA5SP24-201ENST00000516478 95 ntBASIC3.46□□□□□ -1.86
SCN11AQ9UI33 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.46□□□□□ -1.86
SCN11AQ9UI33 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SCN11AQ9UI33 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.46□□□□□ -1.86
SCN11AQ9UI33 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SCN11AQ9UI33 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.46□□□□□ -1.86
SCN11AQ9UI33 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SCN11AQ9UI33 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.46□□□□□ -1.86
SCN11AQ9UI33 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SCN11AQ9UI33 AL159169.1-201ENST00000421119 127 ntBASIC3.46□□□□□ -1.86
SCN11AQ9UI33 VDAC1P3-201ENST00000434069 851 ntBASIC3.46□□□□□ -1.86
SCN11AQ9UI33 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.46□□□□□ -1.86
SCN11AQ9UI33 snoU13.15-201ENST00000459407 104 ntBASIC3.46□□□□□ -1.86
SCN11AQ9UI33 AC118282.1-201ENST00000506408 765 ntBASIC3.46□□□□□ -1.86
SCN11AQ9UI33 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.46□□□□□ -1.86
SCN11AQ9UI33 AC119751.1-201ENST00000513357 765 ntBASIC3.46□□□□□ -1.86
SCN11AQ9UI33 AC096725.1-201ENST00000514266 313 ntBASIC3.46□□□□□ -1.86
SCN11AQ9UI33 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.46□□□□□ -1.86
SCN11AQ9UI33 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.46□□□□□ -1.86
SCN11AQ9UI33 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.46□□□□□ -1.86
SCN11AQ9UI33 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.46□□□□□ -1.86
SCN11AQ9UI33 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.46□□□□□ -1.86
SCN11AQ9UI33 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SCN11AQ9UI33 MIR4635-201ENST00000583759 79 ntBASIC3.46□□□□□ -1.86
SCN11AQ9UI33 ZNF861P-201ENST00000588126 639 ntBASIC3.46□□□□□ -1.86
SCN11AQ9UI33 MIR6715B-201ENST00000637172 77 ntBASIC3.46□□□□□ -1.86
SCN11AQ9UI33 AC007342.7-201ENST00000624610 2337 ntBASIC3.45□□□□□ -1.86
SCN11AQ9UI33 SEPT7P2-202ENST00000398921 823 ntBASIC3.45□□□□□ -1.86
SCN11AQ9UI33 AC004987.3-201ENST00000413879 771 ntBASIC3.45□□□□□ -1.86
SCN11AQ9UI33 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.45□□□□□ -1.86
SCN11AQ9UI33 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.45□□□□□ -1.86
SCN11AQ9UI33 AC093663.2-201ENST00000484625 313 ntBASIC3.45□□□□□ -1.86
SCN11AQ9UI33 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.45□□□□□ -1.86
SCN11AQ9UI33 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.45□□□□□ -1.86
SCN11AQ9UI33 AC008549.1-201ENST00000512900 643 ntBASIC3.45□□□□□ -1.86
SCN11AQ9UI33 RNA5SP148-201ENST00000516527 94 ntBASIC3.45□□□□□ -1.86
SCN11AQ9UI33 AC009977.1-201ENST00000586015 570 ntBASIC3.45□□□□□ -1.86
SCN11AQ9UI33 AL020991.1-201ENST00000612314 373 ntBASIC3.45□□□□□ -1.86
SCN11AQ9UI33 AC004825.2-201ENST00000616634 455 ntBASIC3.45□□□□□ -1.86
SCN11AQ9UI33 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SCN11AQ9UI33 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.45□□□□□ -1.86
SCN11AQ9UI33 AC008264.2-201ENST00000610193 3731 ntBASIC3.45□□□□□ -1.86
SCN11AQ9UI33 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.44□□□□□ -1.86
SCN11AQ9UI33 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SCN11AQ9UI33 SNORD62.1-201ENST00000362541 86 ntBASIC3.44□□□□□ -1.86
SCN11AQ9UI33 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.44□□□□□ -1.86
SCN11AQ9UI33 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.44□□□□□ -1.86
SCN11AQ9UI33 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.44□□□□□ -1.86
SCN11AQ9UI33 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SCN11AQ9UI33 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.44□□□□□ -1.86
SCN11AQ9UI33 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.44□□□□□ -1.86
SCN11AQ9UI33 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.44□□□□□ -1.86
SCN11AQ9UI33 AC092628.2-201ENST00000622492 339 ntBASIC3.44□□□□□ -1.86
SCN11AQ9UI33 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.44□□□□□ -1.86
SCN11AQ9UI33 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SCN11AQ9UI33 AL450326.2-201ENST00000421913 1962 ntBASIC3.44□□□□□ -1.86
SCN11AQ9UI33 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SCN11AQ9UI33 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SCN11AQ9UI33 FAM133CP-201ENST00000332869 704 ntBASIC3.43□□□□□ -1.86
SCN11AQ9UI33 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.43□□□□□ -1.86
SCN11AQ9UI33 RN7SKP44-201ENST00000363602 316 ntBASIC3.43□□□□□ -1.86
SCN11AQ9UI33 RAP1BP1-201ENST00000412709 553 ntBASIC3.43□□□□□ -1.86
SCN11AQ9UI33 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.43□□□□□ -1.86
SCN11AQ9UI33 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SCN11AQ9UI33 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.43□□□□□ -1.86
SCN11AQ9UI33 ZNF658B-202ENST00000615961 3375 ntBASIC3.43□□□□□ -1.86
SCN11AQ9UI33 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SCN11AQ9UI33 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.43□□□□□ -1.86
SCN11AQ9UI33 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.43□□□□□ -1.86
SCN11AQ9UI33 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.43□□□□□ -1.86
SCN11AQ9UI33 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.43□□□□□ -1.86
SCN11AQ9UI33 FTH1P6-201ENST00000430768 320 ntBASIC3.43□□□□□ -1.86
SCN11AQ9UI33 HMGB1P25-201ENST00000468402 607 ntBASIC3.43□□□□□ -1.86
SCN11AQ9UI33 AGGF1P8-201ENST00000562979 1000 ntBASIC3.43□□□□□ -1.86
SCN11AQ9UI33 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.43□□□□□ -1.86
SCN11AQ9UI33 AC009159.1-201ENST00000618386 642 ntBASIC3.43□□□□□ -1.86
SCN11AQ9UI33 AC010338.1-201ENST00000621823 717 ntBASIC3.43□□□□□ -1.86
SCN11AQ9UI33 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SCN11AQ9UI33 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
SCN11AQ9UI33 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SCN11AQ9UI33 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SCN11AQ9UI33 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms