Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC090525.3-201ENST00000605601 189 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 DUSP12P1-201ENST00000612874 516 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 AL138960.1-201ENST00000613838 513 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 AC103705.1-201ENST00000619013 241 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 MIR4272-201ENST00000635924 64 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 INTS6P1-201ENST00000504674 2530 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 AC132219.2-201ENST00000624416 2327 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 OR52B5P-204ENST00000641744 3467 ntBASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL25A1Q9BXS0 AC244517.1-201ENST00000606030 2086 ntBASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 CDY11P-201ENST00000447168 1651 ntBASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 UG0898H09-202ENST00000623646 7040 ntBASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 AL121886.1-201ENST00000358609 435 ntBASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 RNU105B-201ENST00000364478 208 ntBASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 RNA5SP515-201ENST00000364570 118 ntBASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 RNY1P5-201ENST00000383890 115 ntBASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 RNU6-55P-201ENST00000411092 107 ntBASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 Y_RNA.793-201ENST00000411222 111 ntBASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 AC233981.1-201ENST00000423224 461 ntBASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 MED13P1-201ENST00000428342 171 ntBASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 RPS6P12-201ENST00000432491 726 ntBASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 RPL36AP15-201ENST00000444514 266 ntBASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 AURKAPS2-201ENST00000454983 333 ntBASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 RN7SL870P-201ENST00000460111 296 ntBASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 RPL21P93-201ENST00000480465 489 ntBASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 RN7SKP82-201ENST00000516786 223 ntBASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 AC008083.2-201ENST00000546707 476 ntBASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 MIR5188-201ENST00000583467 113 ntBASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 AL162431.4-201ENST00000604674 411 ntBASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 AC087385.3-201ENST00000620477 187 ntBASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.98□□□□□ -1.45
COL25A1Q9BXS0 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 RNU6-525P-201ENST00000363685 104 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 Y_RNA.170-201ENST00000363746 110 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 Y_RNA.200-201ENST00000364018 102 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 RNU1-46P-201ENST00000384425 164 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 RNU6-1117P-201ENST00000384525 104 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 AL031679.1-201ENST00000400616 525 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 AL136131.1-201ENST00000406079 803 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 RPS24P8-201ENST00000431490 402 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 AL445928.1-201ENST00000435545 222 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 FCF1P4-201ENST00000448326 183 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 CHEK2P4-201ENST00000450340 246 ntBASIC5.97□□□□□ -1.45
COL25A1Q9BXS0 Y_RNA.644-201ENST00000459006 113 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms