Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HLA-CQ95604 AC010168.2-201ENST00000562691 5428 ntBASIC6.5□□□□□ -1.37
HLA-CQ95604 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
HLA-CQ95604 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HLA-CQ95604 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HLA-CQ95604 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
HLA-CQ95604 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.5□□□□□ -1.37
HLA-CQ95604 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
HLA-CQ95604 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
HLA-CQ95604 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HLA-CQ95604 AC022325.1-201ENST00000502748 2199 ntBASIC6.5□□□□□ -1.37
HLA-CQ95604 LCOR-201ENST00000286067 4542 ntBASIC6.49□□□□□ -1.37
HLA-CQ95604 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-CQ95604 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-CQ95604 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC6.49□□□□□ -1.37
HLA-CQ95604 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-CQ95604 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC6.49□□□□□ -1.37
HLA-CQ95604 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
HLA-CQ95604 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-CQ95604 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.49□□□□□ -1.37
HLA-CQ95604 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-CQ95604 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-CQ95604 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-CQ95604 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.49□□□□□ -1.37
HLA-CQ95604 Y_RNA.126-201ENST00000363382 111 ntBASIC6.49□□□□□ -1.37
HLA-CQ95604 RPL31P2-201ENST00000413849 377 ntBASIC6.49□□□□□ -1.37
HLA-CQ95604 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.49□□□□□ -1.37
HLA-CQ95604 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.49□□□□□ -1.37
HLA-CQ95604 ELOCP20-201ENST00000422460 345 ntBASIC6.49□□□□□ -1.37
HLA-CQ95604 CFL1P1-202ENST00000432948 411 ntBASIC6.49□□□□□ -1.37
HLA-CQ95604 NEFMP1-201ENST00000443423 1006 ntBASIC6.49□□□□□ -1.37
HLA-CQ95604 AC008264.1-201ENST00000447612 367 ntBASIC6.49□□□□□ -1.37
HLA-CQ95604 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.49□□□□□ -1.37
HLA-CQ95604 RPL7P5-201ENST00000471472 736 ntBASIC6.49□□□□□ -1.37
HLA-CQ95604 COPS8P2-201ENST00000473228 627 ntBASIC6.49□□□□□ -1.37
HLA-CQ95604 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC6.49□□□□□ -1.37
HLA-CQ95604 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.49□□□□□ -1.37
HLA-CQ95604 RNU6-347P-201ENST00000516658 105 ntBASIC6.49□□□□□ -1.37
HLA-CQ95604 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC6.49□□□□□ -1.37
HLA-CQ95604 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC6.49□□□□□ -1.37
HLA-CQ95604 AP001922.4-201ENST00000526967 290 ntBASIC6.49□□□□□ -1.37
HLA-CQ95604 DEFB108D-201ENST00000527787 222 ntBASIC6.49□□□□□ -1.37
HLA-CQ95604 SETP7-201ENST00000552169 453 ntBASIC6.49□□□□□ -1.37
HLA-CQ95604 AL022394.1-201ENST00000606979 292 ntBASIC6.49□□□□□ -1.37
HLA-CQ95604 MIR7159-201ENST00000620587 66 ntBASIC6.49□□□□□ -1.37
HLA-CQ95604 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.49□□□□□ -1.37
HLA-CQ95604 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
HLA-CQ95604 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
HLA-CQ95604 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.49□□□□□ -1.37
HLA-CQ95604 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
HLA-CQ95604 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC6.49□□□□□ -1.37
HLA-CQ95604 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-CQ95604 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-CQ95604 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-CQ95604 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
HLA-CQ95604 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-CQ95604 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-CQ95604 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-CQ95604 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-CQ95604 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-CQ95604 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HLA-CQ95604 CUBNP3-201ENST00000457461 1784 ntBASIC6.49□□□□□ -1.37
HLA-CQ95604 CASC19-228ENST00000641414 1684 ntBASIC6.49□□□□□ -1.37
HLA-CQ95604 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
HLA-CQ95604 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.49□□□□□ -1.37
HLA-CQ95604 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.49□□□□□ -1.37
HLA-CQ95604 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HLA-CQ95604 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HLA-CQ95604 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HLA-CQ95604 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.48□□□□□ -1.37
HLA-CQ95604 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HLA-CQ95604 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
HLA-CQ95604 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HLA-CQ95604 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HLA-CQ95604 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.48□□□□□ -1.37
HLA-CQ95604 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HLA-CQ95604 Y_RNA.29-201ENST00000362570 113 ntBASIC6.48□□□□□ -1.37
HLA-CQ95604 RNU6-770P-201ENST00000363929 105 ntBASIC6.48□□□□□ -1.37
HLA-CQ95604 RNU4-42P-201ENST00000364738 142 ntBASIC6.48□□□□□ -1.37
HLA-CQ95604 RNU6-637P-201ENST00000384050 107 ntBASIC6.48□□□□□ -1.37
HLA-CQ95604 Y_RNA.477-201ENST00000384352 108 ntBASIC6.48□□□□□ -1.37
HLA-CQ95604 MIR1286-201ENST00000408112 78 ntBASIC6.48□□□□□ -1.37
HLA-CQ95604 RN7SKP159-201ENST00000410657 292 ntBASIC6.48□□□□□ -1.37
HLA-CQ95604 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC6.48□□□□□ -1.37
HLA-CQ95604 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.48□□□□□ -1.37
HLA-CQ95604 AC127537.2-201ENST00000439258 465 ntBASIC6.48□□□□□ -1.37
HLA-CQ95604 AC073850.1-201ENST00000449243 255 ntBASIC6.48□□□□□ -1.37
HLA-CQ95604 snoU13.7-201ENST00000459220 104 ntBASIC6.48□□□□□ -1.37
HLA-CQ95604 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
HLA-CQ95604 AC022034.3-201ENST00000471393 478 ntBASIC6.48□□□□□ -1.37
HLA-CQ95604 OR2AO1P-201ENST00000476497 403 ntBASIC6.48□□□□□ -1.37
HLA-CQ95604 AC106800.3-201ENST00000511389 308 ntBASIC6.48□□□□□ -1.37
HLA-CQ95604 RN7SKP98-201ENST00000517070 156 ntBASIC6.48□□□□□ -1.37
HLA-CQ95604 RNU6-111P-201ENST00000517179 105 ntBASIC6.48□□□□□ -1.37
HLA-CQ95604 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC6.48□□□□□ -1.37
HLA-CQ95604 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.48□□□□□ -1.37
HLA-CQ95604 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.48□□□□□ -1.37
HLA-CQ95604 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC6.48□□□□□ -1.37
HLA-CQ95604 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.48□□□□□ -1.37
HLA-CQ95604 AC084783.1-201ENST00000565846 910 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms