Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC106800.3-201ENST00000511389 308 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 AC107393.1-201ENST00000512403 346 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 IGKV1D-22-201ENST00000518953 324 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 COX6CP8-201ENST00000522620 226 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 WBP1LP3-201ENST00000523033 208 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 MIR4703-201ENST00000577728 79 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 MIR4775-201ENST00000581168 75 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 VN1R84P-201ENST00000593697 235 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 AC118658.2-201ENST00000618697 459 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 AC005183.1-201ENST00000603687 1979 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 Y_RNA.126-201ENST00000363382 111 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 RN7SKP162-201ENST00000363605 345 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 RNU6-729P-201ENST00000384399 107 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 DHFRP6-201ENST00000401776 268 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 SPTLC1P2-201ENST00000407089 121 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 AC068533.1-201ENST00000418542 415 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 AC099799.1-201ENST00000439809 192 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 GEMIN2P1-201ENST00000454246 752 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 AC011225.1-201ENST00000457751 369 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 AL161747.1-201ENST00000480068 358 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 AC034222.1-201ENST00000494052 532 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 Y_RNA.710-201ENST00000516975 110 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 RNU1-54P-201ENST00000517181 120 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 AC109329.1-201ENST00000518744 317 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 HIGD1AP6-201ENST00000521833 279 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 AP003733.2-201ENST00000529409 171 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 AC073916.1-201ENST00000545095 130 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 MAGOH2P-202ENST00000584384 429 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 AC012669.1-201ENST00000603209 283 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 RPL12P48-201ENST00000605620 304 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 AL365265.1-201ENST00000621045 234 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 AL122126.1-201ENST00000546905 1318 ntBASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.5□□□□□ -1.37
CTC1Q2NKJ3 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 DDX18P3-201ENST00000404856 2007 ntBASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 AC027088.4-201ENST00000611559 1947 ntBASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 Y_RNA.54-201ENST00000362766 105 ntBASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 SNORA74A-201ENST00000364089 198 ntBASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 RNU1-59P-201ENST00000364829 162 ntBASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 Y_RNA.314-201ENST00000365114 102 ntBASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 HMGB1P17-201ENST00000403495 628 ntBASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 POLHP1-201ENST00000411806 470 ntBASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 USMG5P1-201ENST00000425964 177 ntBASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 GAPDHP58-201ENST00000438477 1006 ntBASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 RPS3AP12-201ENST00000443616 753 ntBASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 NANOGP10-201ENST00000453325 895 ntBASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 RPL23AP71-201ENST00000470966 469 ntBASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 AC074198.2-201ENST00000508153 258 ntBASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 TXNP6-201ENST00000510190 310 ntBASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 RNU4-71P-201ENST00000516258 113 ntBASIC6.49□□□□□ -1.37
CTC1Q2NKJ3 RNA5SP503-201ENST00000517047 117 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms