Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.81□□□□□ -1.96
VBP1P61758 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.81□□□□□ -1.96
VBP1P61758 WDR75-207ENST00000631047 270 ntTSL 5 BASIC2.81□□□□□ -1.96
VBP1P61758 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VBP1P61758 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VBP1P61758 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
VBP1P61758 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
VBP1P61758 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VBP1P61758 AC012618.3-205ENST00000637896 1496 ntBASIC2.8□□□□□ -1.96
VBP1P61758 MIR372-201ENST00000362225 67 ntBASIC2.8□□□□□ -1.96
VBP1P61758 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VBP1P61758 AC007066.1-201ENST00000392902 381 ntBASIC2.8□□□□□ -1.96
VBP1P61758 GSTA8P-201ENST00000404253 637 ntBASIC2.8□□□□□ -1.96
VBP1P61758 LINC01881-201ENST00000416103 412 ntBASIC2.8□□□□□ -1.96
VBP1P61758 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VBP1P61758 UBE2D3P2-201ENST00000424409 445 ntBASIC2.8□□□□□ -1.96
VBP1P61758 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.8□□□□□ -1.96
VBP1P61758 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VBP1P61758 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC2.8□□□□□ -1.96
VBP1P61758 NOTCH2P1-201ENST00000443481 624 ntBASIC2.8□□□□□ -1.96
VBP1P61758 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.8□□□□□ -1.96
VBP1P61758 RPL7P19-201ENST00000469948 618 ntBASIC2.8□□□□□ -1.96
VBP1P61758 AC010460.1-201ENST00000507087 466 ntBASIC2.8□□□□□ -1.96
VBP1P61758 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VBP1P61758 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.8□□□□□ -1.96
VBP1P61758 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC2.8□□□□□ -1.96
VBP1P61758 AL049870.4-201ENST00000555741 486 ntBASIC2.8□□□□□ -1.96
VBP1P61758 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.8□□□□□ -1.96
VBP1P61758 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.8□□□□□ -1.96
VBP1P61758 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.8□□□□□ -1.96
VBP1P61758 AC103881.1-201ENST00000603476 538 ntBASIC2.8□□□□□ -1.96
VBP1P61758 AC010591.1-201ENST00000603941 649 ntBASIC2.8□□□□□ -1.96
VBP1P61758 NUTF2P8-201ENST00000604593 363 ntBASIC2.8□□□□□ -1.96
VBP1P61758 AP004372.1-201ENST00000604842 844 ntBASIC2.8□□□□□ -1.96
VBP1P61758 AL009028.1-201ENST00000604895 802 ntBASIC2.8□□□□□ -1.96
VBP1P61758 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.8□□□□□ -1.96
VBP1P61758 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VBP1P61758 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
VBP1P61758 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VBP1P61758 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.79□□□□□ -1.96
VBP1P61758 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VBP1P61758 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VBP1P61758 ASNSP3-201ENST00000451989 1306 ntBASIC2.79□□□□□ -1.96
VBP1P61758 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VBP1P61758 RNU6-1180P-201ENST00000364935 107 ntBASIC2.79□□□□□ -1.96
VBP1P61758 RNU4-31P-201ENST00000384211 141 ntBASIC2.79□□□□□ -1.96
VBP1P61758 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
VBP1P61758 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.79□□□□□ -1.96
VBP1P61758 AL356057.2-201ENST00000403318 432 ntBASIC2.79□□□□□ -1.96
VBP1P61758 SFR1P1-201ENST00000403720 688 ntBASIC2.79□□□□□ -1.96
VBP1P61758 AL139095.1-201ENST00000404326 391 ntBASIC2.79□□□□□ -1.96
VBP1P61758 SNORD88.1-201ENST00000408684 91 ntBASIC2.79□□□□□ -1.96
VBP1P61758 RNA5SP317-201ENST00000410176 116 ntBASIC2.79□□□□□ -1.96
VBP1P61758 RN7SKP111-201ENST00000410349 271 ntBASIC2.79□□□□□ -1.96
VBP1P61758 RN7SKP278-201ENST00000410504 342 ntBASIC2.79□□□□□ -1.96
VBP1P61758 RNU2-25P-201ENST00000411041 191 ntBASIC2.79□□□□□ -1.96
VBP1P61758 RNA5SP311-201ENST00000411290 116 ntBASIC2.79□□□□□ -1.96
VBP1P61758 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC2.79□□□□□ -1.96
VBP1P61758 YY1P1-201ENST00000427625 668 ntBASIC2.79□□□□□ -1.96
VBP1P61758 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VBP1P61758 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.79□□□□□ -1.96
VBP1P61758 AC091862.1-201ENST00000438016 1100 ntBASIC2.79□□□□□ -1.96
VBP1P61758 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.79□□□□□ -1.96
VBP1P61758 AC234775.1-201ENST00000454247 670 ntBASIC2.79□□□□□ -1.96
VBP1P61758 AC008571.1-201ENST00000467232 300 ntBASIC2.79□□□□□ -1.96
VBP1P61758 AC074386.1-201ENST00000476560 767 ntBASIC2.79□□□□□ -1.96
VBP1P61758 RPL32P9-201ENST00000487963 407 ntBASIC2.79□□□□□ -1.96
VBP1P61758 RN7SL633P-201ENST00000488974 297 ntBASIC2.79□□□□□ -1.96
VBP1P61758 AL133372.1-201ENST00000493565 745 ntBASIC2.79□□□□□ -1.96
VBP1P61758 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.79□□□□□ -1.96
VBP1P61758 AC026412.2-201ENST00000512270 1075 ntBASIC2.79□□□□□ -1.96
VBP1P61758 RN7SKP141-201ENST00000516167 338 ntBASIC2.79□□□□□ -1.96
VBP1P61758 RNA5SP315-201ENST00000516340 116 ntBASIC2.79□□□□□ -1.96
VBP1P61758 RNA5SP312-201ENST00000517068 116 ntBASIC2.79□□□□□ -1.96
VBP1P61758 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.79□□□□□ -1.96
VBP1P61758 RAB9BP1-201ENST00000519581 626 ntBASIC2.79□□□□□ -1.96
VBP1P61758 AC008562.1-201ENST00000521763 330 ntBASIC2.79□□□□□ -1.96
VBP1P61758 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.79□□□□□ -1.96
VBP1P61758 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.79□□□□□ -1.96
VBP1P61758 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.79□□□□□ -1.96
VBP1P61758 AC023043.3-201ENST00000593113 385 ntBASIC2.79□□□□□ -1.96
VBP1P61758 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC2.79□□□□□ -1.96
VBP1P61758 AC068790.4-201ENST00000602474 263 ntBASIC2.79□□□□□ -1.96
VBP1P61758 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.79□□□□□ -1.96
VBP1P61758 MIR6862-1-201ENST00000613016 70 ntBASIC2.79□□□□□ -1.96
VBP1P61758 MIR6862-2-201ENST00000614755 70 ntBASIC2.79□□□□□ -1.96
VBP1P61758 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VBP1P61758 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.79□□□□□ -1.96
VBP1P61758 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.79□□□□□ -1.96
VBP1P61758 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VBP1P61758 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
VBP1P61758 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
VBP1P61758 FAM35BP-202ENST00000497389 3337 ntBASIC2.78□□□□□ -1.96
VBP1P61758 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
VBP1P61758 AL672167.1-206ENST00000356293 943 ntBASIC2.78□□□□□ -1.96
VBP1P61758 RNU6-673P-201ENST00000365084 104 ntBASIC2.78□□□□□ -1.96
VBP1P61758 AL590004.2-201ENST00000404787 371 ntBASIC2.78□□□□□ -1.96
VBP1P61758 RNA5SP274-201ENST00000410484 108 ntBASIC2.78□□□□□ -1.96
VBP1P61758 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC2.78□□□□□ -1.96
VBP1P61758 RPL37P1-201ENST00000432310 284 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms