Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AC118273.1-201ENST00000525324 3006 ntBASIC3.21□□□□□ -1.9
ERCC1P07992 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
ERCC1P07992 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.21□□□□□ -1.9
ERCC1P07992 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.21□□□□□ -1.9
ERCC1P07992 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.2□□□□□ -1.9
ERCC1P07992 MFSD8-213ENST00000641134 1327 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ERCC1P07992 ZNF285B-201ENST00000561698 1767 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ERCC1P07992 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ERCC1P07992 AL079305.1-201ENST00000623159 3008 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
ERCC1P07992 AC004925.1-201ENST00000624256 2706 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 RNU6-50P-201ENST00000362356 103 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 SNORD56.4-201ENST00000363883 71 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 SNORA5A-201ENST00000384111 134 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 RN7SKP285-201ENST00000410137 318 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.2□□□□□ -1.9
ERCC1P07992 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ERCC1P07992 RPS29P4-201ENST00000414733 161 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ERCC1P07992 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.2□□□□□ -1.9
ERCC1P07992 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.2□□□□□ -1.9
ERCC1P07992 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.2□□□□□ -1.9
ERCC1P07992 SSXP4-201ENST00000451349 245 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 HMGB1P15-201ENST00000453854 435 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.2□□□□□ -1.9
ERCC1P07992 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.2□□□□□ -1.9
ERCC1P07992 MTCO3P44-201ENST00000510977 541 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 SNORA76.2-201ENST00000517095 137 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 AC026403.1-201ENST00000518938 295 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.2□□□□□ -1.9
ERCC1P07992 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.2□□□□□ -1.9
ERCC1P07992 TRAV15-201ENST00000556680 249 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.2□□□□□ -1.9
ERCC1P07992 MIR4474-201ENST00000579189 78 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 MIR4425-201ENST00000580572 84 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ERCC1P07992 DPRXP5-201ENST00000604662 539 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 U3.45-201ENST00000607547 219 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 AL121772.2-201ENST00000614331 297 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.2□□□□□ -1.9
ERCC1P07992 AC039056.2-201ENST00000622261 511 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 AP000553.6-201ENST00000641242 118 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ERCC1P07992 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ERCC1P07992 MTND5P31-201ENST00000419366 1374 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
ERCC1P07992 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ERCC1P07992 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
ERCC1P07992 AC002546.1-201ENST00000588041 2504 ntBASIC3.2□□□□□ -1.9
ERCC1P07992 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.2□□□□□ -1.9
ERCC1P07992 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ERCC1P07992 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ERCC1P07992 AC073055.1-201ENST00000456901 1621 ntBASIC3.19□□□□□ -1.9
ERCC1P07992 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ERCC1P07992 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ERCC1P07992 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.19□□□□□ -1.9
ERCC1P07992 MIR218-2-201ENST00000385006 110 ntBASIC3.19□□□□□ -1.9
ERCC1P07992 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
ERCC1P07992 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ERCC1P07992 UBE2V1P15-201ENST00000407776 448 ntBASIC3.19□□□□□ -1.9
ERCC1P07992 RAD23BP2-201ENST00000416003 1207 ntBASIC3.19□□□□□ -1.9
ERCC1P07992 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.19□□□□□ -1.9
ERCC1P07992 AL389915.1-201ENST00000422463 466 ntBASIC3.19□□□□□ -1.9
ERCC1P07992 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.19□□□□□ -1.9
ERCC1P07992 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.19□□□□□ -1.9
ERCC1P07992 HMGN2P20-201ENST00000437531 273 ntBASIC3.19□□□□□ -1.9
ERCC1P07992 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
ERCC1P07992 AL358232.1-201ENST00000448030 501 ntBASIC3.19□□□□□ -1.9
ERCC1P07992 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.19□□□□□ -1.9
ERCC1P07992 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.19□□□□□ -1.9
ERCC1P07992 ACTG1P13-201ENST00000486987 1043 ntBASIC3.19□□□□□ -1.9
ERCC1P07992 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.19□□□□□ -1.9
ERCC1P07992 OR5H5P-201ENST00000503164 928 ntBASIC3.19□□□□□ -1.9
ERCC1P07992 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.19□□□□□ -1.9
ERCC1P07992 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.19□□□□□ -1.9
ERCC1P07992 RN7SKP13-201ENST00000515933 244 ntBASIC3.19□□□□□ -1.9
ERCC1P07992 RNU1-61P-201ENST00000516107 151 ntBASIC3.19□□□□□ -1.9
ERCC1P07992 RNU2-27P-201ENST00000516185 142 ntBASIC3.19□□□□□ -1.9
ERCC1P07992 RNA5SP468-201ENST00000516782 93 ntBASIC3.19□□□□□ -1.9
ERCC1P07992 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.19□□□□□ -1.9
ERCC1P07992 IGJP1-201ENST00000522682 475 ntBASIC3.19□□□□□ -1.9
ERCC1P07992 AC026616.1-201ENST00000523157 525 ntBASIC3.19□□□□□ -1.9
ERCC1P07992 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.19□□□□□ -1.9
ERCC1P07992 OR5AP1P-201ENST00000529730 940 ntBASIC3.19□□□□□ -1.9
ERCC1P07992 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.19□□□□□ -1.9
ERCC1P07992 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.19□□□□□ -1.9
ERCC1P07992 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.19□□□□□ -1.9
ERCC1P07992 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.19□□□□□ -1.9
ERCC1P07992 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.19□□□□□ -1.9
ERCC1P07992 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ERCC1P07992 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.19□□□□□ -1.9
ERCC1P07992 AL355812.1-201ENST00000603215 216 ntBASIC3.19□□□□□ -1.9
ERCC1P07992 AC012467.1-201ENST00000607740 256 ntBASIC3.19□□□□□ -1.9
ERCC1P07992 AC092354.2-201ENST00000607786 514 ntBASIC3.19□□□□□ -1.9
ERCC1P07992 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.19□□□□□ -1.9
ERCC1P07992 AC006213.5-201ENST00000619673 288 ntBASIC3.19□□□□□ -1.9
ERCC1P07992 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.19□□□□□ -1.9
ERCC1P07992 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms