Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RPL7P20-201ENST00000520308 745 ntBASIC3.33□□□□□ -1.88
NUP98P52948 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.33□□□□□ -1.88
NUP98P52948 AL391156.1-201ENST00000554965 554 ntBASIC3.33□□□□□ -1.88
NUP98P52948 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.33□□□□□ -1.88
NUP98P52948 DNAJC19P3-201ENST00000594491 331 ntBASIC3.33□□□□□ -1.88
NUP98P52948 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.33□□□□□ -1.88
NUP98P52948 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.33□□□□□ -1.88
NUP98P52948 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NUP98P52948 AL365361.1-201ENST00000566942 3481 ntBASIC3.33□□□□□ -1.88
NUP98P52948 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.33□□□□□ -1.88
NUP98P52948 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NUP98P52948 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NUP98P52948 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NUP98P52948 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.33□□□□□ -1.88
NUP98P52948 MTCO1P39-201ENST00000426148 480 ntBASIC3.33□□□□□ -1.88
NUP98P52948 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.33□□□□□ -1.88
NUP98P52948 AC233982.1-201ENST00000451247 436 ntBASIC3.33□□□□□ -1.88
NUP98P52948 AC093663.2-201ENST00000484625 313 ntBASIC3.33□□□□□ -1.88
NUP98P52948 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NUP98P52948 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.33□□□□□ -1.88
NUP98P52948 MIR4635-201ENST00000583759 79 ntBASIC3.33□□□□□ -1.88
NUP98P52948 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NUP98P52948 ASNSP3-201ENST00000451989 1306 ntBASIC3.32□□□□□ -1.88
NUP98P52948 OR11H5P-202ENST00000641612 1325 ntBASIC3.32□□□□□ -1.88
NUP98P52948 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.32□□□□□ -1.88
NUP98P52948 RNU6-178P-201ENST00000384631 104 ntBASIC3.32□□□□□ -1.88
NUP98P52948 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NUP98P52948 SEPT7P2-202ENST00000398921 823 ntBASIC3.32□□□□□ -1.88
NUP98P52948 RN7SKP223-201ENST00000410582 62 ntBASIC3.32□□□□□ -1.88
NUP98P52948 AC073136.2-201ENST00000417282 849 ntBASIC3.32□□□□□ -1.88
NUP98P52948 FTH1P6-201ENST00000430768 320 ntBASIC3.32□□□□□ -1.88
NUP98P52948 AL121839.1-201ENST00000556233 1185 ntBASIC3.32□□□□□ -1.88
NUP98P52948 AL135786.2-201ENST00000608422 615 ntBASIC3.32□□□□□ -1.88
NUP98P52948 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.32□□□□□ -1.88
NUP98P52948 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NUP98P52948 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NUP98P52948 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
NUP98P52948 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NUP98P52948 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.31□□□□□ -1.88
NUP98P52948 RPL23AP48-201ENST00000406913 488 ntBASIC3.31□□□□□ -1.88
NUP98P52948 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.31□□□□□ -1.88
NUP98P52948 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.31□□□□□ -1.88
NUP98P52948 TRBV12-1-201ENST00000479785 344 ntBASIC3.31□□□□□ -1.88
NUP98P52948 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.31□□□□□ -1.88
NUP98P52948 AL008729.2-201ENST00000606393 473 ntBASIC3.31□□□□□ -1.88
NUP98P52948 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NUP98P52948 CTSLP2-204ENST00000629029 392 ntBASIC3.31□□□□□ -1.88
NUP98P52948 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NUP98P52948 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.31□□□□□ -1.88
NUP98P52948 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.31□□□□□ -1.88
NUP98P52948 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NUP98P52948 SNORA70B-201ENST00000384210 135 ntBASIC3.3□□□□□ -1.88
NUP98P52948 AL445529.1-201ENST00000398713 389 ntBASIC3.3□□□□□ -1.88
NUP98P52948 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.3□□□□□ -1.88
NUP98P52948 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.3□□□□□ -1.88
NUP98P52948 RPLP0P7-201ENST00000416050 667 ntBASIC3.3□□□□□ -1.88
NUP98P52948 VDAC1P3-201ENST00000434069 851 ntBASIC3.3□□□□□ -1.88
NUP98P52948 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.3□□□□□ -1.88
NUP98P52948 VWA8P1-201ENST00000510889 176 ntBASIC3.3□□□□□ -1.88
NUP98P52948 RN7SKP34-201ENST00000516142 244 ntBASIC3.3□□□□□ -1.88
NUP98P52948 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.3□□□□□ -1.88
NUP98P52948 UBTFL10-201ENST00000528532 562 ntBASIC3.3□□□□□ -1.88
NUP98P52948 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.3□□□□□ -1.88
NUP98P52948 AC009163.5-201ENST00000575421 637 ntBASIC3.3□□□□□ -1.88
NUP98P52948 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.3□□□□□ -1.88
NUP98P52948 AC067838.1-201ENST00000606064 577 ntBASIC3.3□□□□□ -1.88
NUP98P52948 AL159169.2-201ENST00000610061 1269 ntBASIC3.3□□□□□ -1.88
NUP98P52948 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NUP98P52948 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
NUP98P52948 SNRPGP5-201ENST00000456003 220 ntBASIC3.3□□□□□ -1.88
NUP98P52948 RN7SKP283-201ENST00000517197 270 ntBASIC3.3□□□□□ -1.88
NUP98P52948 HPRT1P3-201ENST00000539521 576 ntBASIC3.3□□□□□ -1.88
NUP98P52948 MIR6715A-201ENST00000615929 79 ntBASIC3.3□□□□□ -1.88
NUP98P52948 CR381653.2-201ENST00000624041 768 ntBASIC3.3□□□□□ -1.88
NUP98P52948 MTND5P19-201ENST00000424872 1794 ntBASIC3.29□□□□□ -1.88
NUP98P52948 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NUP98P52948 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NUP98P52948 MIR365B-201ENST00000362317 111 ntBASIC3.29□□□□□ -1.88
NUP98P52948 RNA5SP432-201ENST00000362480 116 ntBASIC3.29□□□□□ -1.88
NUP98P52948 AC009302.1-201ENST00000417147 390 ntBASIC3.29□□□□□ -1.88
NUP98P52948 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.29□□□□□ -1.88
NUP98P52948 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.29□□□□□ -1.88
NUP98P52948 EEF1B2P7-201ENST00000451177 676 ntBASIC3.29□□□□□ -1.88
NUP98P52948 AC243772.1-201ENST00000451620 410 ntBASIC3.29□□□□□ -1.88
NUP98P52948 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.29□□□□□ -1.88
NUP98P52948 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.29□□□□□ -1.88
NUP98P52948 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.29□□□□□ -1.88
NUP98P52948 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.29□□□□□ -1.88
NUP98P52948 AC083760.1-201ENST00000589621 670 ntBASIC3.29□□□□□ -1.88
NUP98P52948 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NUP98P52948 AC110741.2-201ENST00000605278 268 ntBASIC3.29□□□□□ -1.88
NUP98P52948 AC010809.3-201ENST00000621310 641 ntBASIC3.29□□□□□ -1.88
NUP98P52948 AP006437.1-201ENST00000641440 3685 ntBASIC3.29□□□□□ -1.88
NUP98P52948 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
NUP98P52948 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NUP98P52948 AL355379.1-201ENST00000405542 640 ntBASIC3.28□□□□□ -1.88
NUP98P52948 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.28□□□□□ -1.88
NUP98P52948 AC118282.1-201ENST00000506408 765 ntBASIC3.28□□□□□ -1.88
NUP98P52948 AC119751.1-201ENST00000513357 765 ntBASIC3.28□□□□□ -1.88
NUP98P52948 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms