Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.89□□□□□ -1.95
HTTP42858 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.89□□□□□ -1.95
HTTP42858 TGIF1P1-201ENST00000558095 802 ntBASIC2.89□□□□□ -1.95
HTTP42858 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC2.89□□□□□ -1.95
HTTP42858 AC080128.1-201ENST00000474389 1917 ntBASIC2.89□□□□□ -1.95
HTTP42858 RNU1-35P-201ENST00000362782 153 ntBASIC2.88□□□□□ -1.95
HTTP42858 HMGB1P16-201ENST00000447155 540 ntBASIC2.88□□□□□ -1.95
HTTP42858 AC108860.1-201ENST00000484521 383 ntBASIC2.88□□□□□ -1.95
HTTP42858 RPL36AP51-201ENST00000487216 318 ntBASIC2.88□□□□□ -1.95
HTTP42858 AC106872.3-201ENST00000495104 446 ntBASIC2.88□□□□□ -1.95
HTTP42858 RN7SKP24-201ENST00000515888 284 ntBASIC2.88□□□□□ -1.95
HTTP42858 HMGB1P50-201ENST00000605814 607 ntBASIC2.88□□□□□ -1.95
HTTP42858 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.88□□□□□ -1.95
HTTP42858 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HTTP42858 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HTTP42858 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HTTP42858 Y_RNA.338-201ENST00000365320 114 ntBASIC2.88□□□□□ -1.95
HTTP42858 RNU1-89P-201ENST00000384592 164 ntBASIC2.88□□□□□ -1.95
HTTP42858 SNORA46-201ENST00000384762 135 ntBASIC2.88□□□□□ -1.95
HTTP42858 AL024474.1-201ENST00000404655 591 ntBASIC2.88□□□□□ -1.95
HTTP42858 RPL23AP11-201ENST00000475260 469 ntBASIC2.88□□□□□ -1.95
HTTP42858 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.88□□□□□ -1.95
HTTP42858 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HTTP42858 RALGAPA1P1-201ENST00000443361 6232 ntBASIC2.88□□□□□ -1.95
HTTP42858 AC005539.1-201ENST00000443768 1479 ntBASIC2.88□□□□□ -1.95
HTTP42858 AC109315.1-201ENST00000584143 1347 ntBASIC2.88□□□□□ -1.95
HTTP42858 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HTTP42858 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HTTP42858 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HTTP42858 AL662791.1-201ENST00000441992 928 ntBASIC2.88□□□□□ -1.95
HTTP42858 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.88□□□□□ -1.95
HTTP42858 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.88□□□□□ -1.95
HTTP42858 AC104454.1-201ENST00000421341 1401 ntBASIC2.87□□□□□ -1.95
HTTP42858 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC2.87□□□□□ -1.95
HTTP42858 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.87□□□□□ -1.95
HTTP42858 RPL23AP22-201ENST00000437556 453 ntBASIC2.87□□□□□ -1.95
HTTP42858 AC108729.3-201ENST00000513484 108 ntBASIC2.87□□□□□ -1.95
HTTP42858 AC068313.1-201ENST00000604028 1008 ntBASIC2.87□□□□□ -1.95
HTTP42858 SNORA35B-201ENST00000607417 129 ntBASIC2.87□□□□□ -1.95
HTTP42858 AC006111.3-201ENST00000622137 383 ntBASIC2.87□□□□□ -1.95
HTTP42858 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HTTP42858 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
HTTP42858 BX679664.1-201ENST00000434429 253 ntBASIC2.87□□□□□ -1.95
HTTP42858 AC091179.1-201ENST00000461606 579 ntBASIC2.87□□□□□ -1.95
HTTP42858 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HTTP42858 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.87□□□□□ -1.95
HTTP42858 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.87□□□□□ -1.95
HTTP42858 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HTTP42858 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HTTP42858 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
HTTP42858 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HTTP42858 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
HTTP42858 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC2.87□□□□□ -1.95
HTTP42858 AC011816.1-201ENST00000441346 546 ntBASIC2.86□□□□□ -1.95
HTTP42858 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.86□□□□□ -1.95
HTTP42858 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.86□□□□□ -1.95
HTTP42858 AC010198.2-201ENST00000550612 259 ntBASIC2.86□□□□□ -1.95
HTTP42858 NRBF2P1-201ENST00000587407 859 ntBASIC2.86□□□□□ -1.95
HTTP42858 AC019072.1-201ENST00000604535 1551 ntBASIC2.86□□□□□ -1.95
HTTP42858 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HTTP42858 SNORD62.1-201ENST00000362541 86 ntBASIC2.86□□□□□ -1.95
HTTP42858 RPL31P45-201ENST00000419532 356 ntBASIC2.86□□□□□ -1.95
HTTP42858 CYCSP49-201ENST00000420810 319 ntBASIC2.86□□□□□ -1.95
HTTP42858 AC116337.1-201ENST00000509680 687 ntBASIC2.86□□□□□ -1.95
HTTP42858 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.86□□□□□ -1.95
HTTP42858 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.86□□□□□ -1.95
HTTP42858 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HTTP42858 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
HTTP42858 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HTTP42858 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HTTP42858 AL356292.1-201ENST00000283110 373 ntBASIC2.86□□□□□ -1.95
HTTP42858 AC009414.1-201ENST00000427200 443 ntBASIC2.86□□□□□ -1.95
HTTP42858 AL353705.4-201ENST00000449661 238 ntBASIC2.86□□□□□ -1.95
HTTP42858 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.86□□□□□ -1.95
HTTP42858 U4.3-201ENST00000621047 82 ntBASIC2.86□□□□□ -1.95
HTTP42858 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
HTTP42858 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HTTP42858 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
HTTP42858 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
HTTP42858 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC2.85□□□□□ -1.95
HTTP42858 AC022031.1-201ENST00000585985 2593 ntBASIC2.85□□□□□ -1.95
HTTP42858 RNU6-1159P-201ENST00000362933 107 ntBASIC2.85□□□□□ -1.95
HTTP42858 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.85□□□□□ -1.95
HTTP42858 MTHFD2P4-201ENST00000515074 1025 ntBASIC2.85□□□□□ -1.95
HTTP42858 SCARNA17.1-201ENST00000516211 143 ntBASIC2.85□□□□□ -1.95
HTTP42858 SCARNA17.2-201ENST00000516334 143 ntBASIC2.85□□□□□ -1.95
HTTP42858 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.85□□□□□ -1.95
HTTP42858 AC008507.1-201ENST00000587506 734 ntBASIC2.85□□□□□ -1.95
HTTP42858 SCARNA17.4-201ENST00000614296 143 ntBASIC2.85□□□□□ -1.95
HTTP42858 AC244517.3-201ENST00000616254 1235 ntBASIC2.85□□□□□ -1.95
HTTP42858 CR381653.2-201ENST00000624041 768 ntBASIC2.85□□□□□ -1.95
HTTP42858 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
HTTP42858 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC2.85□□□□□ -1.95
HTTP42858 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
HTTP42858 U3.11-201ENST00000364476 212 ntBASIC2.85□□□□□ -1.95
HTTP42858 IGKV2D-23-201ENST00000518179 286 ntBASIC2.85□□□□□ -1.95
HTTP42858 OR1AB1P-201ENST00000585564 761 ntBASIC2.85□□□□□ -1.95
HTTP42858 AC079298.2-201ENST00000623885 459 ntBASIC2.85□□□□□ -1.95
HTTP42858 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HTTP42858 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms