Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 Z82210.1-201ENST00000440037 231 ntBASIC7.64□□□□□ -1.19
CD44P16070 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC7.64□□□□□ -1.19
CD44P16070 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC7.64□□□□□ -1.19
CD44P16070 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC7.64□□□□□ -1.19
CD44P16070 NACAP3-201ENST00000552100 481 ntBASIC7.64□□□□□ -1.19
CD44P16070 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.64□□□□□ -1.19
CD44P16070 RN7SL311P-201ENST00000579858 306 ntBASIC7.64□□□□□ -1.19
CD44P16070 SNORD39.2-201ENST00000579995 76 ntBASIC7.64□□□□□ -1.19
CD44P16070 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC7.64□□□□□ -1.19
CD44P16070 AC005070.2-201ENST00000604391 260 ntBASIC7.64□□□□□ -1.19
CD44P16070 AL450226.2-201ENST00000622913 439 ntBASIC7.64□□□□□ -1.19
CD44P16070 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.64□□□□□ -1.19
CD44P16070 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.64□□□□□ -1.19
CD44P16070 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.64□□□□□ -1.19
CD44P16070 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.64□□□□□ -1.19
CD44P16070 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.64□□□□□ -1.19
CD44P16070 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CD44P16070 RACGAP1P-201ENST00000550663 1879 ntBASIC7.64□□□□□ -1.19
CD44P16070 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CD44P16070 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CD44P16070 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CD44P16070 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC7.63□□□□□ -1.19
CD44P16070 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CD44P16070 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CD44P16070 AC068647.1-201ENST00000489539 2265 ntBASIC7.63□□□□□ -1.19
CD44P16070 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CD44P16070 AC008957.3-201ENST00000624112 2242 ntBASIC7.63□□□□□ -1.19
CD44P16070 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CD44P16070 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.63□□□□□ -1.19
CD44P16070 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.63□□□□□ -1.19
CD44P16070 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CD44P16070 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CD44P16070 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
CD44P16070 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
CD44P16070 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC7.63□□□□□ -1.19
CD44P16070 CDC123-202ENST00000378900 933 ntTSL 5 BASIC7.63□□□□□ -1.19
CD44P16070 WARS2P1-201ENST00000429678 537 ntBASIC7.63□□□□□ -1.19
CD44P16070 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CD44P16070 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC7.63□□□□□ -1.19
CD44P16070 AC234771.2-201ENST00000445718 597 ntBASIC7.63□□□□□ -1.19
CD44P16070 GAPDHP25-201ENST00000447061 1001 ntBASIC7.63□□□□□ -1.19
CD44P16070 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC7.63□□□□□ -1.19
CD44P16070 AC079944.1-201ENST00000485426 495 ntBASIC7.63□□□□□ -1.19
CD44P16070 AL591122.1-201ENST00000487348 492 ntBASIC7.63□□□□□ -1.19
CD44P16070 MTND3P25-201ENST00000509243 135 ntBASIC7.63□□□□□ -1.19
CD44P16070 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC7.63□□□□□ -1.19
CD44P16070 AP001328.1-201ENST00000528550 176 ntBASIC7.63□□□□□ -1.19
CD44P16070 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC7.63□□□□□ -1.19
CD44P16070 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CD44P16070 CTSLP2-201ENST00000580501 394 ntBASIC7.63□□□□□ -1.19
CD44P16070 MIR5692A1-201ENST00000580523 69 ntBASIC7.63□□□□□ -1.19
CD44P16070 AC005046.1-201ENST00000608515 625 ntBASIC7.63□□□□□ -1.19
CD44P16070 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
CD44P16070 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.63□□□□□ -1.19
CD44P16070 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CD44P16070 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CD44P16070 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.63□□□□□ -1.19
CD44P16070 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CD44P16070 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
CD44P16070 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CD44P16070 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CD44P16070 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CD44P16070 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.62□□□□□ -1.19
CD44P16070 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CD44P16070 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
CD44P16070 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.62□□□□□ -1.19
CD44P16070 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.62□□□□□ -1.19
CD44P16070 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
CD44P16070 RN7SKP55-201ENST00000364888 307 ntBASIC7.62□□□□□ -1.19
CD44P16070 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CD44P16070 RNU6-905P-201ENST00000384434 107 ntBASIC7.62□□□□□ -1.19
CD44P16070 AL133260.1-201ENST00000405720 405 ntBASIC7.62□□□□□ -1.19
CD44P16070 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC7.62□□□□□ -1.19
CD44P16070 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC7.62□□□□□ -1.19
CD44P16070 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC7.62□□□□□ -1.19
CD44P16070 LAMTOR3P1-201ENST00000428620 370 ntBASIC7.62□□□□□ -1.19
CD44P16070 GAPDHP58-201ENST00000438477 1006 ntBASIC7.62□□□□□ -1.19
CD44P16070 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC7.62□□□□□ -1.19
CD44P16070 AL031681.1-201ENST00000443304 400 ntBASIC7.62□□□□□ -1.19
CD44P16070 AL136126.1-201ENST00000473603 402 ntBASIC7.62□□□□□ -1.19
CD44P16070 AC004453.1-201ENST00000487895 408 ntBASIC7.62□□□□□ -1.19
CD44P16070 RN7SL561P-201ENST00000488553 281 ntBASIC7.62□□□□□ -1.19
CD44P16070 RNU7-175P-201ENST00000515915 61 ntBASIC7.62□□□□□ -1.19
CD44P16070 SNORA31.3-201ENST00000516029 96 ntBASIC7.62□□□□□ -1.19
CD44P16070 RNU2-56P-201ENST00000516826 190 ntBASIC7.62□□□□□ -1.19
CD44P16070 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC7.62□□□□□ -1.19
CD44P16070 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC7.62□□□□□ -1.19
CD44P16070 DEFB108D-201ENST00000527787 222 ntBASIC7.62□□□□□ -1.19
CD44P16070 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC7.62□□□□□ -1.19
CD44P16070 MIR4685-201ENST00000578185 69 ntBASIC7.62□□□□□ -1.19
CD44P16070 COX6CP7-201ENST00000597056 208 ntBASIC7.62□□□□□ -1.19
CD44P16070 AC062037.1-201ENST00000605302 128 ntBASIC7.62□□□□□ -1.19
CD44P16070 AL354718.1-201ENST00000619764 589 ntBASIC7.62□□□□□ -1.19
CD44P16070 AC106754.2-201ENST00000623006 233 ntBASIC7.62□□□□□ -1.19
CD44P16070 Clostridiales-1.2-201ENST00000636724 160 ntBASIC7.62□□□□□ -1.19
CD44P16070 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
CD44P16070 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CD44P16070 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.62□□□□□ -1.19
CD44P16070 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CD44P16070 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms