Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.65□□□□□ -1.67
TRIM38O00635 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM38O00635 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM38O00635 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM38O00635 HSPE1P3-201ENST00000559254 309 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.65□□□□□ -1.67
TRIM38O00635 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.65□□□□□ -1.67
TRIM38O00635 MTCO3P24-201ENST00000572729 782 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
TRIM38O00635 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM38O00635 AC012409.3-201ENST00000611343 981 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM38O00635 AC068831.8-201ENST00000620171 435 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 AC079248.2-201ENST00000623779 326 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TRIM38O00635 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM38O00635 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM38O00635 AC006971.1-201ENST00000407916 4486 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 EOGT-210ENST00000615922 1931 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM38O00635 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM38O00635 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM38O00635 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TRIM38O00635 AC010300.1-201ENST00000600671 5134 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
TRIM38O00635 AL445487.1-201ENST00000415694 1580 ntBASIC4.65□□□□□ -1.67
TRIM38O00635 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM38O00635 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM38O00635 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM38O00635 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM38O00635 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM38O00635 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM38O00635 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM38O00635 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM38O00635 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 TLK1P1-201ENST00000456760 2440 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM38O00635 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM38O00635 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM38O00635 OR14L1P-202ENST00000641545 3009 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM38O00635 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM38O00635 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM38O00635 Y_RNA.516-201ENST00000384541 124 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 RNU1-82P-201ENST00000390851 165 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 ATP5F1P4-201ENST00000397288 746 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 HDGFP1-201ENST00000405943 252 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 RNU4-25P-201ENST00000410569 230 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 CYCSP10-201ENST00000417973 294 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM38O00635 OR51AB1P-201ENST00000429046 620 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM38O00635 HMGB3P9-201ENST00000441799 583 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM38O00635 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM38O00635 RPL29P29-201ENST00000448725 423 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 AC097262.1-201ENST00000452559 548 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM38O00635 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM38O00635 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM38O00635 RPL21P103-201ENST00000479921 488 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 AC108078.3-201ENST00000502633 489 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM38O00635 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM38O00635 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.64□□□□□ -1.67
TRIM38O00635 AC010424.1-201ENST00000506336 297 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM38O00635 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM38O00635 AC006499.2-201ENST00000513470 337 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.64□□□□□ -1.67
TRIM38O00635 RNU1-6P-201ENST00000516290 144 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.64□□□□□ -1.67
TRIM38O00635 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM38O00635 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 DEFB131D-201ENST00000526803 184 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM38O00635 AC068831.4-201ENST00000556118 109 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM38O00635 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM38O00635 ACTR3BP3-201ENST00000565577 979 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 EIF1P4-201ENST00000572664 335 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 SNORA74C-1-201ENST00000580726 201 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 AP001180.3-201ENST00000582221 145 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 VN1R92P-201ENST00000598511 928 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 AL163642.2-201ENST00000604722 1019 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 AC073114.1-201ENST00000612027 490 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM38O00635 GDI2P1-201ENST00000429312 1336 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
TRIM38O00635 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
TRIM38O00635 IQCB2P-201ENST00000401788 1633 ntBASIC4.64□□□□□ -1.67
TRIM38O00635 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM38O00635 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM38O00635 OR4G11P-202ENST00000642116 1414 ntBASIC4.63□□□□□ -1.67
TRIM38O00635 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
TRIM38O00635 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM38O00635 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM38O00635 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM38O00635 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM38O00635 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms