Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC007967.1-201ENST00000455422 1159 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AL031183.1-201ENST00000457667 207 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AC096992.1-201ENST00000459808 709 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AC034236.1-201ENST00000469891 373 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AC008638.1-201ENST00000506035 866 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 SCARNA13-201ENST00000516672 275 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 IGLV3-17-201ENST00000519099 244 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 RANP9-201ENST00000519957 271 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AC090136.1-201ENST00000520009 240 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 PTS-202ENST00000524931 696 ntTSL 3 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AP000790.1-201ENST00000528891 737 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AP000857.1-201ENST00000532151 543 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 GLUD1P4-201ENST00000590914 418 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 VN1R78P-201ENST00000597393 564 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 IGHV3-29-201ENST00000604817 344 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AC034102.8-201ENST00000615146 484 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AL645568.2-201ENST00000432815 1337 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 OR1S2-201ENST00000302592 978 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 RNVU1-3-201ENST00000364313 161 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 RNA5SP130-201ENST00000364431 114 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 FIG4-202ENST00000368941 791 ntTSL 3 BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 SET-203ENST00000372688 801 ntTSL 2 BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 RNU6-171P-201ENST00000384354 107 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 RNA5SP252-201ENST00000391131 119 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 AC110754.1-201ENST00000399740 601 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 RPL23AP27-201ENST00000415161 451 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 COX6CP15-201ENST00000426313 211 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 Z77249.1-201ENST00000444622 1175 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 SYPL1P1-201ENST00000473622 768 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 MRPL42P6-201ENST00000486397 371 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 DYNLL1P6-201ENST00000503440 264 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 CDH12P2-201ENST00000504393 298 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 AC111000.3-201ENST00000508057 576 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 AC025768.1-201ENST00000510057 267 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 SNORA9.3-201ENST00000516383 129 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 FAM60DP-201ENST00000524174 632 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 AC090616.3-201ENST00000582184 217 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 MIR3922-201ENST00000585192 84 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 AC106791.2-201ENST00000604680 391 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 AC015802.5-201ENST00000607478 399 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 ZNF519P1-201ENST00000449011 1626 ntBASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
CHKB-CPT1BH3BT56 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 DDX6P1-205ENST00000441966 1436 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 RNA5SP447-201ENST00000363749 119 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 SOD2P1-201ENST00000396543 562 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 RPL21P65-201ENST00000406094 466 ntBASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CHKB-CPT1BH3BT56 Z75741.2-201ENST00000417272 1167 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms