Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 YWHAEP7-203ENST00000622054 312 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 AL160413.1-201ENST00000622780 310 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS11Q9H270 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS11Q9H270 AC107068.1-201ENST00000563286 4218 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
VPS11Q9H270 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
VPS11Q9H270 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS11Q9H270 SALL4P2-201ENST00000423288 2910 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VPS11Q9H270 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS11Q9H270 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS11Q9H270 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS11Q9H270 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS11Q9H270 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS11Q9H270 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS11Q9H270 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS11Q9H270 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VPS11Q9H270 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
VPS11Q9H270 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS11Q9H270 AC107982.1-201ENST00000507171 1300 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS11Q9H270 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS11Q9H270 Y_RNA.138-201ENST00000363462 102 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
VPS11Q9H270 RNU6-921P-201ENST00000384361 107 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 AC009804.1-201ENST00000400949 179 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 MIR1182-201ENST00000408363 97 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS11Q9H270 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS11Q9H270 AC093655.2-201ENST00000425735 631 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS11Q9H270 RPS29P14-201ENST00000431518 171 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.03□□□□□ -1.6
VPS11Q9H270 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS11Q9H270 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS11Q9H270 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS11Q9H270 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS11Q9H270 AC022364.2-201ENST00000457963 554 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 AC087879.1-201ENST00000474343 374 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 ACTG1P13-201ENST00000486987 1043 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
VPS11Q9H270 OR5M14P-201ENST00000506803 618 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS11Q9H270 FGF7P4-201ENST00000509595 295 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS11Q9H270 MTCYBP43-201ENST00000513621 740 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 AP000790.1-201ENST00000528891 737 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 CYCSP28-201ENST00000534284 321 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 OR5AN2P-201ENST00000534535 896 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS11Q9H270 AC138915.2-201ENST00000569776 97 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 MIR4504-201ENST00000577413 92 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 AC090312.1-201ENST00000580637 348 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS11Q9H270 AL139286.1-201ENST00000604465 483 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 AL161729.4-201ENST00000604650 476 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 AC116312.1-201ENST00000606841 314 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 AC005962.2-201ENST00000611427 652 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 AC069209.1-201ENST00000619282 651 ntBASIC5.03□□□□□ -1.6
VPS11Q9H270 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS11Q9H270 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
VPS11Q9H270 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
VPS11Q9H270 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS11Q9H270 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS11Q9H270 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS11Q9H270 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
VPS11Q9H270 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
VPS11Q9H270 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS11Q9H270 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS11Q9H270 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS11Q9H270 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS11Q9H270 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS11Q9H270 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS11Q9H270 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS11Q9H270 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
VPS11Q9H270 OR4A15-201ENST00000314706 1035 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 Y_RNA.142-201ENST00000363491 102 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 RNU1-85P-201ENST00000364127 164 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 Y_RNA.311-201ENST00000365068 96 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 Y_RNA.419-201ENST00000384041 102 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 AL031985.1-201ENST00000392713 418 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS11Q9H270 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS11Q9H270 AIMP1P1-201ENST00000418670 937 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS11Q9H270 AC096632.1-201ENST00000427395 310 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 NPM1P34-201ENST00000428821 893 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 AL050321.1-201ENST00000432363 400 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS11Q9H270 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS11Q9H270 AC007537.2-201ENST00000472093 511 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS11Q9H270 RN7SL184P-201ENST00000488308 297 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 RPL7P24-201ENST00000493052 752 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS11Q9H270 AC026427.2-201ENST00000506228 536 ntBASIC5.02□□□□□ -1.61
VPS11Q9H270 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS11Q9H270 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms