Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL109941.1-201ENST00000401925 229 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 RPL31P52-201ENST00000407532 367 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 AL023807.1-201ENST00000407932 359 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 RN7SKP216-201ENST00000411050 312 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 USP9YP13-201ENST00000417797 480 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 AIMP1P1-201ENST00000418670 937 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC004552.1-201ENST00000419089 348 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 Z97055.1-201ENST00000419730 712 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC234779.1-201ENST00000425910 285 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 RPS26P47-201ENST00000427219 348 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC023347.2-201ENST00000433994 462 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 AL596276.1-201ENST00000434465 418 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 CEACAMP9-201ENST00000442990 513 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC244505.5-201ENST00000443639 207 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 RPS26P3-201ENST00000470205 348 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 RPS26P28-201ENST00000470806 348 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC017015.1-201ENST00000477387 286 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 RN7SL809P-201ENST00000482040 297 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC090543.2-201ENST00000483963 348 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC004057.1-201ENST00000485827 348 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 FAM172BP-201ENST00000487497 1089 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNX18Q96RF0 RNU6-506P-201ENST00000516553 94 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 PAICSP4-201ENST00000517543 1253 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 MED28P5-201ENST00000528254 438 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 ZNF705CP-201ENST00000530515 889 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC063949.1-201ENST00000552900 865 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC084757.1-201ENST00000559987 490 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 MIR5697-201ENST00000578045 78 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 AL606834.2-201ENST00000602954 668 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC008638.3-201ENST00000603341 463 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 AL139395.1-201ENST00000603662 160 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC097468.3-201ENST00000607956 456 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 CR381572.2-201ENST00000624852 397 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 OR5AK4P-201ENST00000635912 903 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 OR5H6-203ENST00000642105 978 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX18Q96RF0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 DCAF13P1-201ENST00000495256 1330 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX18Q96RF0 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX18Q96RF0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX18Q96RF0 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX18Q96RF0 AP002907.1-201ENST00000606361 1430 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX18Q96RF0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.37□□□□□ -1.71
SNX18Q96RF0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.37□□□□□ -1.71
SNX18Q96RF0 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SNX18Q96RF0 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX18Q96RF0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SNX18Q96RF0 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SNX18Q96RF0 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX18Q96RF0 OR4G2P-201ENST00000328113 903 ntBASIC4.37□□□□□ -1.71
SNX18Q96RF0 RNA5SP52-201ENST00000362448 134 ntBASIC4.37□□□□□ -1.71
SNX18Q96RF0 RNA5SP123-201ENST00000363244 119 ntBASIC4.37□□□□□ -1.71
SNX18Q96RF0 RNA5SP513-201ENST00000364648 118 ntBASIC4.37□□□□□ -1.71
SNX18Q96RF0 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX18Q96RF0 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SNX18Q96RF0 RNU5A-6P-201ENST00000384136 116 ntBASIC4.37□□□□□ -1.71
SNX18Q96RF0 Y_RNA.582-201ENST00000391023 95 ntBASIC4.37□□□□□ -1.71
SNX18Q96RF0 RNA5SP345-201ENST00000410646 108 ntBASIC4.37□□□□□ -1.71
SNX18Q96RF0 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.37□□□□□ -1.71
SNX18Q96RF0 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.37□□□□□ -1.71
SNX18Q96RF0 HMGB3P23-201ENST00000414981 585 ntBASIC4.37□□□□□ -1.71
SNX18Q96RF0 OR8F1P-201ENST00000425243 930 ntBASIC4.37□□□□□ -1.71
SNX18Q96RF0 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.37□□□□□ -1.71
SNX18Q96RF0 SNRPEP7-201ENST00000438350 220 ntBASIC4.37□□□□□ -1.71
SNX18Q96RF0 LSM1P1-201ENST00000438629 273 ntBASIC4.37□□□□□ -1.71
SNX18Q96RF0 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.37□□□□□ -1.71
SNX18Q96RF0 AL353748.1-201ENST00000440753 474 ntBASIC4.37□□□□□ -1.71
SNX18Q96RF0 RPL34P20-201ENST00000442771 351 ntBASIC4.37□□□□□ -1.71
SNX18Q96RF0 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.37□□□□□ -1.71
SNX18Q96RF0 GDI2P2-201ENST00000445131 608 ntBASIC4.37□□□□□ -1.71
SNX18Q96RF0 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX18Q96RF0 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.37□□□□□ -1.71
SNX18Q96RF0 AC000111.2-201ENST00000448200 210 ntBASIC4.37□□□□□ -1.71
SNX18Q96RF0 USP9YP12-201ENST00000450481 570 ntBASIC4.37□□□□□ -1.71
SNX18Q96RF0 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms