Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 RNA5SP502-201ENST00000362694 119 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 RNU6-335P-201ENST00000364563 113 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 RNA5SP189-201ENST00000364920 115 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 RNU6-413P-201ENST00000384115 107 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 RNU11-4P-201ENST00000391149 133 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AC016769.3-201ENST00000396562 315 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AL161449.1-201ENST00000414531 1199 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 RPS3AP37-201ENST00000419176 745 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 FNDC3CP-201ENST00000420795 1155 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AL358472.1-201ENST00000431295 329 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AL138799.3-201ENST00000438968 350 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 NPM1P49-201ENST00000448027 714 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 DUXAP8-207ENST00000456786 622 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 RPS20P24-201ENST00000457473 361 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 RPL36AP13-201ENST00000457490 317 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 RPL38P1-201ENST00000460914 211 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AC010460.1-201ENST00000507087 466 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 MTCYBP16-201ENST00000509187 1129 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AC005921.1-201ENST00000510589 286 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 RNU6-1225P-201ENST00000516336 65 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 MTCO1P49-201ENST00000523429 802 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AC034105.4-201ENST00000568304 277 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AC053481.4-201ENST00000583164 216 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AC020914.4-201ENST00000597690 277 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AL160237.3-201ENST00000604114 1013 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AL139286.1-201ENST00000604465 483 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AL049634.3-201ENST00000604968 457 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AC124312.4-201ENST00000605533 310 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AP001521.1-201ENST00000609150 300 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AC006329.2-201ENST00000611491 394 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 DUXAP10-204ENST00000612052 616 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AC090246.1-201ENST00000616499 426 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 AL121895.2-201ENST00000619558 447 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 MTND2P41-201ENST00000637599 773 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.16□□□□□ -1.74
PRPF39Q86UA1 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRPF39Q86UA1 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PRPF39Q86UA1 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.74
PRPF39Q86UA1 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PRPF39Q86UA1 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
PRPF39Q86UA1 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.15□□□□□ -1.74
PRPF39Q86UA1 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 RPL32P23-201ENST00000397237 405 ntBASIC4.15□□□□□ -1.75
PRPF39Q86UA1 SNRPEP2-201ENST00000397592 279 ntBASIC4.15□□□□□ -1.75
PRPF39Q86UA1 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 AC106883.1-201ENST00000418805 562 ntBASIC4.15□□□□□ -1.75
PRPF39Q86UA1 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 MTCO2P23-201ENST00000425216 680 ntBASIC4.15□□□□□ -1.75
PRPF39Q86UA1 OR8F1P-201ENST00000425243 930 ntBASIC4.15□□□□□ -1.75
PRPF39Q86UA1 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 snoU13.3-201ENST00000459441 104 ntBASIC4.15□□□□□ -1.75
PRPF39Q86UA1 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 AP004371.1-201ENST00000525240 214 ntBASIC4.15□□□□□ -1.75
PRPF39Q86UA1 MTCYBP41-201ENST00000528913 1123 ntBASIC4.15□□□□□ -1.75
PRPF39Q86UA1 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.15□□□□□ -1.75
PRPF39Q86UA1 RN7SL339P-201ENST00000580597 296 ntBASIC4.15□□□□□ -1.75
PRPF39Q86UA1 VN1R79P-201ENST00000593540 513 ntBASIC4.15□□□□□ -1.75
PRPF39Q86UA1 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms