Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
HSPG2P98160 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
HSPG2P98160 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HSPG2P98160 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HSPG2P98160 MIR499A-201ENST00000384903 122 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
HSPG2P98160 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.72□□□□□ -2.13
HSPG2P98160 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.72□□□□□ -2.13
HSPG2P98160 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.72□□□□□ -2.13
HSPG2P98160 AP000867.2-201ENST00000532468 320 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 AC022884.3-201ENST00000579571 248 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 AL356321.1-201ENST00000621360 228 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
HSPG2P98160 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
HSPG2P98160 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HSPG2P98160 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
HSPG2P98160 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HSPG2P98160 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC1.72□□□□□ -2.13
HSPG2P98160 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HSPG2P98160 Y_RNA.595-201ENST00000410403 105 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC1.72□□□□□ -2.13
HSPG2P98160 HMGB1P48-201ENST00000446155 598 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 RN7SL442P-201ENST00000473804 320 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 SCARNA17.1-201ENST00000516211 143 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 SCARNA17.2-201ENST00000516334 143 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 RN7SKP82-201ENST00000516786 223 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 MIR2276-201ENST00000516886 89 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HSPG2P98160 AC010620.2-201ENST00000600135 313 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 AC007938.3-201ENST00000604965 623 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 SCARNA17.4-201ENST00000614296 143 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 AL353997.5-201ENST00000618886 171 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 AC092608.2-201ENST00000624427 218 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 CTSLP2-204ENST00000629029 392 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HSPG2P98160 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HSPG2P98160 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HSPG2P98160 AC006020.1-201ENST00000420179 1854 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.72□□□□□ -2.13
HSPG2P98160 MRPS18BP2-201ENST00000434310 759 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 RPL7P20-201ENST00000520308 745 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 AC068657.1-201ENST00000520807 306 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.72□□□□□ -2.13
HSPG2P98160 HMGN2P47-201ENST00000559378 272 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 AL158196.1-201ENST00000616786 434 ntBASIC1.72□□□□□ -2.13
HSPG2P98160 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HSPG2P98160 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC1.71□□□□□ -2.13
HSPG2P98160 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.71□□□□□ -2.13
HSPG2P98160 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC1.71□□□□□ -2.13
HSPG2P98160 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HSPG2P98160 RPL7P25-201ENST00000404151 721 ntBASIC1.71□□□□□ -2.14
HSPG2P98160 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.71□□□□□ -2.14
HSPG2P98160 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.71□□□□□ -2.14
HSPG2P98160 MTCO1P52-201ENST00000433928 531 ntBASIC1.71□□□□□ -2.14
HSPG2P98160 TRBV1-201ENST00000476502 284 ntBASIC1.71□□□□□ -2.14
HSPG2P98160 YWHAZP1-201ENST00000556286 722 ntBASIC1.71□□□□□ -2.14
HSPG2P98160 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC1.71□□□□□ -2.14
HSPG2P98160 AC073476.4-201ENST00000628409 72 ntBASIC1.71□□□□□ -2.14
HSPG2P98160 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC1.71□□□□□ -2.14
HSPG2P98160 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
HSPG2P98160 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC1.71□□□□□ -2.14
HSPG2P98160 CYCSP45-201ENST00000402289 315 ntBASIC1.71□□□□□ -2.14
HSPG2P98160 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.71□□□□□ -2.14
HSPG2P98160 RANP4-201ENST00000413361 655 ntBASIC1.71□□□□□ -2.14
HSPG2P98160 Z99127.3-201ENST00000448158 395 ntBASIC1.71□□□□□ -2.14
HSPG2P98160 DNAJC19P1-201ENST00000455312 319 ntBASIC1.71□□□□□ -2.14
HSPG2P98160 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC1.71□□□□□ -2.14
HSPG2P98160 AC116337.1-201ENST00000509680 687 ntBASIC1.71□□□□□ -2.14
HSPG2P98160 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC1.71□□□□□ -2.14
HSPG2P98160 LINC00901.1-201ENST00000617252 152 ntBASIC1.71□□□□□ -2.14
HSPG2P98160 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.71□□□□□ -2.14
HSPG2P98160 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
HSPG2P98160 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
HSPG2P98160 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.71□□□□□ -2.14
HSPG2P98160 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
HSPG2P98160 AL359715.5-201ENST00000623431 443 ntBASIC1.71□□□□□ -2.14
HSPG2P98160 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HSPG2P98160 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
HSPG2P98160 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
HSPG2P98160 HMGB1P16-201ENST00000447155 540 ntBASIC1.7□□□□□ -2.14
HSPG2P98160 RPL5P16-201ENST00000471467 790 ntBASIC1.7□□□□□ -2.14
HSPG2P98160 RPL23AP11-201ENST00000475260 469 ntBASIC1.7□□□□□ -2.14
HSPG2P98160 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.7□□□□□ -2.14
HSPG2P98160 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HSPG2P98160 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.7□□□□□ -2.14
HSPG2P98160 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC1.7□□□□□ -2.14
HSPG2P98160 AC141257.3-201ENST00000572906 215 ntBASIC1.7□□□□□ -2.14
HSPG2P98160 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HSPG2P98160 AC103798.2-201ENST00000624292 632 ntBASIC1.7□□□□□ -2.14
HSPG2P98160 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
HSPG2P98160 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC1.7□□□□□ -2.14
HSPG2P98160 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
HSPG2P98160 AL138827.1-201ENST00000402666 306 ntBASIC1.7□□□□□ -2.14
HSPG2P98160 RPS6P4-201ENST00000494693 758 ntBASIC1.7□□□□□ -2.14
HSPG2P98160 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC1.7□□□□□ -2.14
HSPG2P98160 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.7□□□□□ -2.14
HSPG2P98160 AC245166.1-201ENST00000521012 253 ntBASIC1.7□□□□□ -2.14
HSPG2P98160 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.7□□□□□ -2.14
HSPG2P98160 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HSPG2P98160 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms