Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MCCD1P59942 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.39□□□□□ -1.39
MCCD1P59942 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
MCCD1P59942 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MCCD1P59942 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
MCCD1P59942 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MCCD1P59942 RNA5SP273-201ENST00000362484 113 ntBASIC6.39□□□□□ -1.39
MCCD1P59942 RNU6-1243P-201ENST00000364028 107 ntBASIC6.39□□□□□ -1.39
MCCD1P59942 RN7SKP275-201ENST00000364626 301 ntBASIC6.39□□□□□ -1.39
MCCD1P59942 RN7SKP78-201ENST00000364711 318 ntBASIC6.39□□□□□ -1.39
MCCD1P59942 RNU6-1040P-201ENST00000383974 107 ntBASIC6.39□□□□□ -1.39
MCCD1P59942 SNORA24.1-201ENST00000384401 135 ntBASIC6.39□□□□□ -1.39
MCCD1P59942 Y_RNA.576-201ENST00000384781 102 ntBASIC6.39□□□□□ -1.39
MCCD1P59942 HMGB3P2-201ENST00000411913 584 ntBASIC6.39□□□□□ -1.39
MCCD1P59942 AL139095.3-201ENST00000419672 1203 ntBASIC6.39□□□□□ -1.39
MCCD1P59942 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.39□□□□□ -1.39
MCCD1P59942 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.39□□□□□ -1.39
MCCD1P59942 RPL23AP89-201ENST00000439324 255 ntBASIC6.39□□□□□ -1.39
MCCD1P59942 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC6.39□□□□□ -1.39
MCCD1P59942 AC073109.1-201ENST00000445066 978 ntBASIC6.39□□□□□ -1.39
MCCD1P59942 AC010733.1-201ENST00000451515 401 ntBASIC6.39□□□□□ -1.39
MCCD1P59942 RNU7-59P-201ENST00000459101 61 ntBASIC6.39□□□□□ -1.39
MCCD1P59942 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC6.39□□□□□ -1.39
MCCD1P59942 TBCAP3-201ENST00000512475 312 ntBASIC6.39□□□□□ -1.39
MCCD1P59942 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.39□□□□□ -1.39
MCCD1P59942 NRBF2P4-201ENST00000520874 850 ntBASIC6.39□□□□□ -1.39
MCCD1P59942 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.39□□□□□ -1.39
MCCD1P59942 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC6.39□□□□□ -1.39
MCCD1P59942 MTCO3P23-201ENST00000561363 289 ntBASIC6.39□□□□□ -1.39
MCCD1P59942 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.39□□□□□ -1.39
MCCD1P59942 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.39□□□□□ -1.39
MCCD1P59942 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.39□□□□□ -1.39
MCCD1P59942 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.39□□□□□ -1.39
MCCD1P59942 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.39□□□□□ -1.39
MCCD1P59942 NANOGP3-201ENST00000605855 286 ntBASIC6.39□□□□□ -1.39
MCCD1P59942 uc_338.26-201ENST00000612659 160 ntBASIC6.39□□□□□ -1.39
MCCD1P59942 AL355365.1-201ENST00000616480 294 ntBASIC6.39□□□□□ -1.39
MCCD1P59942 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.39□□□□□ -1.39
MCCD1P59942 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MCCD1P59942 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MCCD1P59942 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.39□□□□□ -1.39
MCCD1P59942 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MCCD1P59942 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.39□□□□□ -1.39
MCCD1P59942 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
MCCD1P59942 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
MCCD1P59942 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MCCD1P59942 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
MCCD1P59942 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MCCD1P59942 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MCCD1P59942 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MCCD1P59942 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
MCCD1P59942 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MCCD1P59942 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
MCCD1P59942 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
MCCD1P59942 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MCCD1P59942 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MCCD1P59942 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MCCD1P59942 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MCCD1P59942 Y_RNA.135-201ENST00000363439 95 ntBASIC6.38□□□□□ -1.39
MCCD1P59942 RNA5SP232-201ENST00000364144 119 ntBASIC6.38□□□□□ -1.39
MCCD1P59942 Y_RNA.212-201ENST00000364177 102 ntBASIC6.38□□□□□ -1.39
MCCD1P59942 RNA5SP500-201ENST00000364486 119 ntBASIC6.38□□□□□ -1.39
MCCD1P59942 RN7SKP187-201ENST00000365536 330 ntBASIC6.38□□□□□ -1.39
MCCD1P59942 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MCCD1P59942 SNORD116-11-201ENST00000383882 92 ntBASIC6.38□□□□□ -1.39
MCCD1P59942 RNU6-954P-201ENST00000411355 107 ntBASIC6.38□□□□□ -1.39
MCCD1P59942 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.38□□□□□ -1.39
MCCD1P59942 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC6.38□□□□□ -1.39
MCCD1P59942 AC093106.2-201ENST00000428212 385 ntBASIC6.38□□□□□ -1.39
MCCD1P59942 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.38□□□□□ -1.39
MCCD1P59942 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.38□□□□□ -1.39
MCCD1P59942 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.38□□□□□ -1.39
MCCD1P59942 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.38□□□□□ -1.39
MCCD1P59942 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.38□□□□□ -1.39
MCCD1P59942 AL122020.1-201ENST00000472287 459 ntBASIC6.38□□□□□ -1.39
MCCD1P59942 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.38□□□□□ -1.39
MCCD1P59942 AC008638.1-201ENST00000506035 866 ntBASIC6.38□□□□□ -1.39
MCCD1P59942 RFPL4AP5-201ENST00000514977 504 ntBASIC6.38□□□□□ -1.39
MCCD1P59942 GAPDHP62-201ENST00000515313 990 ntBASIC6.38□□□□□ -1.39
MCCD1P59942 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.38□□□□□ -1.39
MCCD1P59942 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.38□□□□□ -1.39
MCCD1P59942 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC6.38□□□□□ -1.39
MCCD1P59942 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MCCD1P59942 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
MCCD1P59942 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC6.38□□□□□ -1.39
MCCD1P59942 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.38□□□□□ -1.39
MCCD1P59942 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.38□□□□□ -1.39
MCCD1P59942 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.38□□□□□ -1.39
MCCD1P59942 MIR6128-201ENST00000615528 109 ntBASIC6.38□□□□□ -1.39
MCCD1P59942 AC144833.1-201ENST00000567953 4089 ntBASIC6.38□□□□□ -1.39
MCCD1P59942 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
MCCD1P59942 PHKBP1-201ENST00000450951 1951 ntBASIC6.38□□□□□ -1.39
MCCD1P59942 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.38□□□□□ -1.39
MCCD1P59942 AL592148.3-201ENST00000608771 2646 ntBASIC6.38□□□□□ -1.39
MCCD1P59942 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
MCCD1P59942 AC121333.1-201ENST00000567488 2709 ntBASIC6.38□□□□□ -1.39
MCCD1P59942 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MCCD1P59942 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MCCD1P59942 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
MCCD1P59942 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms