Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 USP9YP13-201ENST00000417797 480 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 RPL30P3-201ENST00000424262 333 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 CKS1BP6-201ENST00000424932 240 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AC010975.2-201ENST00000427781 588 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AL451139.1-201ENST00000434718 346 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AL450263.2-201ENST00000439400 589 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 RPL7L1P1-201ENST00000448259 785 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 OR1H1P-201ENST00000448731 937 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 OR6K1P-201ENST00000456766 971 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AC103987.1-201ENST00000473394 348 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AC090686.1-201ENST00000481577 749 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AC011005.3-201ENST00000491624 395 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AC020890.1-201ENST00000491837 504 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 RN7SL558P-201ENST00000497468 299 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AC096751.1-202ENST00000502691 1067 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 RNU6-709P-201ENST00000517257 104 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AP001880.2-201ENST00000538233 448 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 PARP1P2-201ENST00000556806 195 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 RN7SL435P-201ENST00000584418 282 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AC090948.2-201ENST00000607363 564 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AC109347.2-201ENST00000610220 349 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AC092794.1-201ENST00000612734 582 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AL445264.1-201ENST00000621719 171 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 AL603839.4-201ENST00000624658 1005 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 CRYM-AS1-204ENST00000637983 556 ntBASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHB1Q9Y5F3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 RNU1-130P-201ENST00000363930 160 ntBASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 RNU6-777P-201ENST00000364265 104 ntBASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 SNORA40.3-201ENST00000390964 122 ntBASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 U3.35-201ENST00000408405 208 ntBASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 MTCO1P17-201ENST00000411522 491 ntBASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 FCF1P9-201ENST00000412546 282 ntBASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 EIF4HP2-201ENST00000424380 563 ntBASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AL356583.2-201ENST00000426536 280 ntBASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 MTND1P4-201ENST00000435196 415 ntBASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 RPS3AP54-201ENST00000435535 734 ntBASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AC091862.1-201ENST00000438016 1100 ntBASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AC090142.1-201ENST00000465776 462 ntBASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AC093767.1-201ENST00000504523 156 ntBASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AC108064.1-201ENST00000513791 460 ntBASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AC034159.1-201ENST00000513885 583 ntBASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 IGKV1-32-201ENST00000519290 311 ntBASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AP002748.2-201ENST00000528671 348 ntBASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AC022878.1-201ENST00000530684 149 ntBASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AC107918.3-201ENST00000533272 382 ntBASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHB1Q9Y5F3 AP005119.2-201ENST00000579735 1105 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms