Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSX3Q99909 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.56□□□□□ -1.84
SSX3Q99909 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.56□□□□□ -1.84
SSX3Q99909 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.56□□□□□ -1.84
SSX3Q99909 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSX3Q99909 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.56□□□□□ -1.84
SSX3Q99909 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SSX3Q99909 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.56□□□□□ -1.84
SSX3Q99909 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSX3Q99909 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SSX3Q99909 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.56□□□□□ -1.84
SSX3Q99909 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSX3Q99909 AC008033.1-201ENST00000216407 1162 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSX3Q99909 MIR331-201ENST00000362302 94 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 RNU6-1249P-201ENST00000363237 111 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SSX3Q99909 RNU1-63P-201ENST00000383902 164 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 MIR3065-201ENST00000390137 79 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 RPL31P1-201ENST00000398116 372 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 RNU2-28P-201ENST00000410457 189 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 RNA5SP306-201ENST00000411087 107 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 AC009237.5-201ENST00000414271 501 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 AC007390.1-201ENST00000415722 356 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 RAD23BP2-201ENST00000416003 1207 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.56□□□□□ -1.84
SSX3Q99909 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 KCTD10P1-201ENST00000434203 625 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 SNORA71B-202ENST00000439232 272 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.56□□□□□ -1.84
SSX3Q99909 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.56□□□□□ -1.84
SSX3Q99909 AC004022.1-201ENST00000447766 1066 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 VN1R32P-201ENST00000452234 905 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.56□□□□□ -1.84
SSX3Q99909 DHFRP3-201ENST00000455595 559 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 NECAP1P2-201ENST00000455668 727 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 RPL7P1-201ENST00000468161 747 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 AC010618.1-201ENST00000469924 477 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 RN7SL812P-201ENST00000493791 279 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 KLRA1P-201ENST00000503499 986 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SSX3Q99909 PRELID3BP5-201ENST00000508612 460 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 MTCO2P32-201ENST00000514865 403 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 RN7SKP122-201ENST00000515923 296 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.56□□□□□ -1.84
SSX3Q99909 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.56□□□□□ -1.84
SSX3Q99909 AC027309.2-201ENST00000520566 192 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 MTND1P6-201ENST00000523621 946 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 OR7E13P-201ENST00000526052 910 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 AC090502.2-201ENST00000549267 280 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.56□□□□□ -1.84
SSX3Q99909 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.56□□□□□ -1.84
SSX3Q99909 MIR3939-201ENST00000582614 106 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 KPNA2P3-201ENST00000584190 848 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.56□□□□□ -1.84
SSX3Q99909 MTCO2P2-201ENST00000591258 225 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 AL390838.2-201ENST00000602394 274 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 RPP40P2-201ENST00000603596 712 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 AC113403.1-201ENST00000604910 193 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 ARF4P1-201ENST00000605447 541 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.56□□□□□ -1.84
SSX3Q99909 AC005962.2-201ENST00000611427 652 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 uc_338.13-201ENST00000618243 179 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.56□□□□□ -1.84
SSX3Q99909 AC092184.1-201ENST00000625042 715 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.56□□□□□ -1.84
SSX3Q99909 MTND2P41-201ENST00000637599 773 ntBASIC3.56□□□□□ -1.84
SSX3Q99909 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.56□□□□□ -1.84
SSX3Q99909 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.56□□□□□ -1.84
SSX3Q99909 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.56□□□□□ -1.84
SSX3Q99909 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SSX3Q99909 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SSX3Q99909 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
SSX3Q99909 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
SSX3Q99909 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.55□□□□□ -1.84
SSX3Q99909 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSX3Q99909 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
SSX3Q99909 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.55□□□□□ -1.84
SSX3Q99909 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SSX3Q99909 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.55□□□□□ -1.84
SSX3Q99909 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.55□□□□□ -1.84
SSX3Q99909 AC068538.1-201ENST00000376856 336 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 OR6C69P-201ENST00000394268 893 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 RNU6-584P-201ENST00000410350 95 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 MTATP6P20-201ENST00000414147 562 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 RPS3AP37-201ENST00000419176 745 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 MRPS36P1-201ENST00000421291 307 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.55□□□□□ -1.84
SSX3Q99909 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.55□□□□□ -1.84
SSX3Q99909 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.55□□□□□ -1.84
SSX3Q99909 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.55□□□□□ -1.84
SSX3Q99909 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 USP9YP31-201ENST00000431405 881 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 NEK4P1-201ENST00000433383 879 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 NANOGP2-201ENST00000435391 727 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 RPS3AP54-201ENST00000435535 734 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms