Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.1□□□□□ -1.43
HPS1Q92902 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.1□□□□□ -1.43
HPS1Q92902 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.1□□□□□ -1.43
HPS1Q92902 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HPS1Q92902 AC005725.1-201ENST00000577346 2607 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.1□□□□□ -1.43
HPS1Q92902 AL445437.1-201ENST00000623157 3087 ntBASIC6.1□□□□□ -1.43
HPS1Q92902 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
HPS1Q92902 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.09□□□□□ -1.43
HPS1Q92902 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
HPS1Q92902 AC232271.1-201ENST00000602455 2715 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HPS1Q92902 AL512353.3-201ENST00000417517 1326 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HPS1Q92902 AC006116.1-201ENST00000587908 2171 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
HPS1Q92902 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HPS1Q92902 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HPS1Q92902 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
HPS1Q92902 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HPS1Q92902 RNU6-858P-201ENST00000362436 107 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 RNU6-1017P-201ENST00000363613 106 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 RNU6-434P-201ENST00000384376 107 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 RNU6-417P-201ENST00000384712 107 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 RNU6-1168P-201ENST00000390831 104 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 RNU6-174P-201ENST00000410406 106 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.09□□□□□ -1.43
HPS1Q92902 SYF2P2-201ENST00000417620 583 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC6.09□□□□□ -1.43
HPS1Q92902 AC134879.1-201ENST00000426062 394 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 AL121916.1-201ENST00000429405 308 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.09□□□□□ -1.43
HPS1Q92902 PUDPP2-201ENST00000431423 643 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 AL445928.1-201ENST00000435545 222 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.09□□□□□ -1.43
HPS1Q92902 AC073476.1-201ENST00000452854 407 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 TRBV26-201ENST00000456572 344 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 BX323845.2-201ENST00000458382 234 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 AC084198.1-201ENST00000477747 402 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 AC110792.1-201ENST00000491826 472 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 SNX18P24-201ENST00000505249 671 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HPS1Q92902 IGLVIV-64-201ENST00000518581 301 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 HMGB1P42-201ENST00000532126 553 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 DUX4L52-201ENST00000549363 777 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC6.09□□□□□ -1.43
HPS1Q92902 NDUFA3P4-201ENST00000560814 250 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.09□□□□□ -1.43
HPS1Q92902 AC005341.1-201ENST00000571086 708 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.09□□□□□ -1.43
HPS1Q92902 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC6.09□□□□□ -1.43
HPS1Q92902 SNORA70D-201ENST00000578836 135 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 RN7SL426P-201ENST00000579106 295 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 MIR3144-201ENST00000579460 79 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.09□□□□□ -1.43
HPS1Q92902 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC6.09□□□□□ -1.43
HPS1Q92902 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 AL359547.2-201ENST00000615810 418 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC6.09□□□□□ -1.43
HPS1Q92902 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HPS1Q92902 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HPS1Q92902 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.09□□□□□ -1.43
HPS1Q92902 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HPS1Q92902 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HPS1Q92902 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HPS1Q92902 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HPS1Q92902 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HPS1Q92902 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
HPS1Q92902 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
HPS1Q92902 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
HPS1Q92902 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
HPS1Q92902 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.09□□□□□ -1.44
HPS1Q92902 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
HPS1Q92902 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.09□□□□□ -1.44
HPS1Q92902 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HPS1Q92902 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.09□□□□□ -1.44
HPS1Q92902 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
HPS1Q92902 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HPS1Q92902 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC6.08□□□□□ -1.44
HPS1Q92902 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HPS1Q92902 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HPS1Q92902 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HPS1Q92902 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
HPS1Q92902 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HPS1Q92902 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HPS1Q92902 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HPS1Q92902 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HPS1Q92902 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.08□□□□□ -1.44
HPS1Q92902 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HPS1Q92902 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HPS1Q92902 RNY1P16-201ENST00000363063 111 ntBASIC6.08□□□□□ -1.44
HPS1Q92902 RNA5SP114-201ENST00000363780 113 ntBASIC6.08□□□□□ -1.44
HPS1Q92902 RN7SKP118-201ENST00000364331 330 ntBASIC6.08□□□□□ -1.44
HPS1Q92902 RN7SKP237-201ENST00000364663 301 ntBASIC6.08□□□□□ -1.44
HPS1Q92902 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HPS1Q92902 SNORD20-201ENST00000384550 80 ntBASIC6.08□□□□□ -1.44
HPS1Q92902 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HPS1Q92902 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HPS1Q92902 AL024474.1-201ENST00000404655 591 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms