Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AL357078.2-201ENST00000416486 427 ntBASIC3.53□□□□□ -1.84
HOXA9P31269 MTATP6P11-201ENST00000428071 670 ntBASIC3.53□□□□□ -1.84
HOXA9P31269 RPS24P8-201ENST00000431490 402 ntBASIC3.53□□□□□ -1.84
HOXA9P31269 AC105402.2-201ENST00000438503 358 ntBASIC3.53□□□□□ -1.84
HOXA9P31269 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.53□□□□□ -1.84
HOXA9P31269 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXA9P31269 S100A11P2-201ENST00000467589 312 ntBASIC3.53□□□□□ -1.84
HOXA9P31269 RPS3AP43-201ENST00000479743 781 ntBASIC3.53□□□□□ -1.84
HOXA9P31269 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXA9P31269 PTGES3P3-201ENST00000511479 482 ntBASIC3.53□□□□□ -1.84
HOXA9P31269 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXA9P31269 AC119751.5-201ENST00000514077 770 ntBASIC3.53□□□□□ -1.84
HOXA9P31269 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXA9P31269 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXA9P31269 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXA9P31269 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.53□□□□□ -1.84
HOXA9P31269 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXA9P31269 AC006254.3-201ENST00000603353 884 ntBASIC3.53□□□□□ -1.84
HOXA9P31269 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXA9P31269 AC020923.1-201ENST00000624021 917 ntBASIC3.53□□□□□ -1.84
HOXA9P31269 AC015726.3-201ENST00000624501 418 ntBASIC3.53□□□□□ -1.84
HOXA9P31269 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXA9P31269 AC068647.1-201ENST00000489539 2265 ntBASIC3.53□□□□□ -1.85
HOXA9P31269 AC009501.3-201ENST00000605001 1352 ntBASIC3.52□□□□□ -1.85
HOXA9P31269 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
HOXA9P31269 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXA9P31269 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HOXA9P31269 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXA9P31269 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
HOXA9P31269 GNG5P1-201ENST00000255500 204 ntBASIC3.52□□□□□ -1.85
HOXA9P31269 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HOXA9P31269 RNU6-283P-201ENST00000364788 107 ntBASIC3.52□□□□□ -1.85
HOXA9P31269 SNORD51.1-201ENST00000365405 77 ntBASIC3.52□□□□□ -1.85
HOXA9P31269 UBA52P6-201ENST00000399822 382 ntBASIC3.52□□□□□ -1.85
HOXA9P31269 GSTA8P-201ENST00000404253 637 ntBASIC3.52□□□□□ -1.85
HOXA9P31269 SNORA11.2-201ENST00000408318 127 ntBASIC3.52□□□□□ -1.85
HOXA9P31269 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.52□□□□□ -1.85
HOXA9P31269 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXA9P31269 AL353678.1-201ENST00000422735 741 ntBASIC3.52□□□□□ -1.85
HOXA9P31269 NDUFA5P10-201ENST00000432147 357 ntBASIC3.52□□□□□ -1.85
HOXA9P31269 MTND2P21-201ENST00000436242 1042 ntBASIC3.52□□□□□ -1.85
HOXA9P31269 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXA9P31269 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXA9P31269 AC078918.1-201ENST00000498515 228 ntBASIC3.52□□□□□ -1.85
HOXA9P31269 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXA9P31269 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXA9P31269 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXA9P31269 HMGB1P46-201ENST00000520062 610 ntBASIC3.52□□□□□ -1.85
HOXA9P31269 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXA9P31269 CKS1BP1-201ENST00000555221 240 ntBASIC3.52□□□□□ -1.85
HOXA9P31269 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXA9P31269 MIR4738-201ENST00000579134 87 ntBASIC3.52□□□□□ -1.85
HOXA9P31269 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.52□□□□□ -1.85
HOXA9P31269 AC067852.3-201ENST00000589177 561 ntBASIC3.52□□□□□ -1.85
HOXA9P31269 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXA9P31269 AC055764.2-201ENST00000610089 670 ntBASIC3.52□□□□□ -1.85
HOXA9P31269 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HOXA9P31269 AL162574.2-201ENST00000614618 657 ntBASIC3.52□□□□□ -1.85
HOXA9P31269 AC009464.1-201ENST00000615731 469 ntBASIC3.52□□□□□ -1.85
HOXA9P31269 AC092628.2-201ENST00000622492 339 ntBASIC3.52□□□□□ -1.85
HOXA9P31269 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HOXA9P31269 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
HOXA9P31269 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HOXA9P31269 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXA9P31269 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXA9P31269 AL359715.4-201ENST00000606629 1436 ntBASIC3.52□□□□□ -1.85
HOXA9P31269 AC073073.2-201ENST00000609827 2578 ntBASIC3.52□□□□□ -1.85
HOXA9P31269 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
HOXA9P31269 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXA9P31269 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXA9P31269 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
HOXA9P31269 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXA9P31269 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXA9P31269 MTND4P24-201ENST00000424002 397 ntBASIC3.51□□□□□ -1.85
HOXA9P31269 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXA9P31269 AL590762.3-201ENST00000436372 640 ntBASIC3.51□□□□□ -1.85
HOXA9P31269 AC006994.1-201ENST00000438212 839 ntBASIC3.51□□□□□ -1.85
HOXA9P31269 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXA9P31269 AC074367.1-201ENST00000438685 1125 ntBASIC3.51□□□□□ -1.85
HOXA9P31269 MTCYBP31-201ENST00000438855 1122 ntBASIC3.51□□□□□ -1.85
HOXA9P31269 AC127537.2-201ENST00000439258 465 ntBASIC3.51□□□□□ -1.85
HOXA9P31269 AL357552.1-201ENST00000445254 415 ntBASIC3.51□□□□□ -1.85
HOXA9P31269 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXA9P31269 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
HOXA9P31269 AL157827.1-201ENST00000447622 132 ntBASIC3.51□□□□□ -1.85
HOXA9P31269 AC097262.1-201ENST00000452559 548 ntBASIC3.51□□□□□ -1.85
HOXA9P31269 RPL7P38-201ENST00000488396 739 ntBASIC3.51□□□□□ -1.85
HOXA9P31269 SUMO1P1-201ENST00000497904 306 ntBASIC3.51□□□□□ -1.85
HOXA9P31269 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXA9P31269 AC021678.1-201ENST00000505195 936 ntBASIC3.51□□□□□ -1.85
HOXA9P31269 COL6A4P2-205ENST00000509855 506 ntBASIC3.51□□□□□ -1.85
HOXA9P31269 RNU1-103P-201ENST00000516502 125 ntBASIC3.51□□□□□ -1.85
HOXA9P31269 NOP56P3-201ENST00000549457 385 ntBASIC3.51□□□□□ -1.85
HOXA9P31269 AC005476.1-201ENST00000554427 397 ntBASIC3.51□□□□□ -1.85
HOXA9P31269 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXA9P31269 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.51□□□□□ -1.85
HOXA9P31269 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXA9P31269 OR4H6P-202ENST00000603819 340 ntBASIC3.51□□□□□ -1.85
HOXA9P31269 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.51□□□□□ -1.85
HOXA9P31269 AC025016.1-201ENST00000616746 682 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms