Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CUX2O14529 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.22□□□□□ -1.57
CUX2O14529 AC024153.1-201ENST00000603103 365 ntBASIC5.22□□□□□ -1.57
CUX2O14529 uc_338.1-201ENST00000612113 180 ntBASIC5.22□□□□□ -1.57
CUX2O14529 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.22□□□□□ -1.57
CUX2O14529 PROS2P-201ENST00000474651 1951 ntBASIC5.22□□□□□ -1.57
CUX2O14529 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC5.22□□□□□ -1.57
CUX2O14529 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.22□□□□□ -1.57
CUX2O14529 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
CUX2O14529 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CUX2O14529 MIR22-201ENST00000362190 85 ntBASIC5.21□□□□□ -1.58
CUX2O14529 AP002088.1-201ENST00000382740 395 ntBASIC5.21□□□□□ -1.58
CUX2O14529 RNU6-851P-201ENST00000384565 107 ntBASIC5.21□□□□□ -1.58
CUX2O14529 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.21□□□□□ -1.58
CUX2O14529 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CUX2O14529 ETF1P3-201ENST00000430422 1160 ntBASIC5.21□□□□□ -1.58
CUX2O14529 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.21□□□□□ -1.58
CUX2O14529 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CUX2O14529 MRPS31P2-201ENST00000451581 518 ntBASIC5.21□□□□□ -1.58
CUX2O14529 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.21□□□□□ -1.58
CUX2O14529 RN7SKP283-201ENST00000517197 270 ntBASIC5.21□□□□□ -1.58
CUX2O14529 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.21□□□□□ -1.58
CUX2O14529 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.21□□□□□ -1.58
CUX2O14529 AC107016.2-201ENST00000547968 190 ntBASIC5.21□□□□□ -1.58
CUX2O14529 AC015911.5-201ENST00000587076 451 ntBASIC5.21□□□□□ -1.58
CUX2O14529 RMST_8.1-201ENST00000610287 165 ntBASIC5.21□□□□□ -1.58
CUX2O14529 AL122125.1-201ENST00000616999 600 ntBASIC5.21□□□□□ -1.58
CUX2O14529 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CUX2O14529 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CUX2O14529 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CUX2O14529 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CUX2O14529 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.21□□□□□ -1.58
CUX2O14529 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CUX2O14529 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC5.21□□□□□ -1.58
CUX2O14529 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CUX2O14529 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CUX2O14529 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CUX2O14529 Z98941.1-201ENST00000407764 100 ntBASIC5.2□□□□□ -1.58
CUX2O14529 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.2□□□□□ -1.58
CUX2O14529 RPS26P40-201ENST00000435209 294 ntBASIC5.2□□□□□ -1.58
CUX2O14529 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.2□□□□□ -1.58
CUX2O14529 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.2□□□□□ -1.58
CUX2O14529 AC098583.1-201ENST00000480875 255 ntBASIC5.2□□□□□ -1.58
CUX2O14529 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.2□□□□□ -1.58
CUX2O14529 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.2□□□□□ -1.58
CUX2O14529 uc_338.32-201ENST00000615087 172 ntBASIC5.2□□□□□ -1.58
CUX2O14529 OR4G2P-202ENST00000641004 1759 ntBASIC5.2□□□□□ -1.58
CUX2O14529 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CUX2O14529 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CUX2O14529 U3.42-201ENST00000408746 214 ntBASIC5.2□□□□□ -1.58
CUX2O14529 RNA5SP296-201ENST00000410523 111 ntBASIC5.2□□□□□ -1.58
CUX2O14529 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CUX2O14529 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.2□□□□□ -1.58
CUX2O14529 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.2□□□□□ -1.58
CUX2O14529 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CUX2O14529 AP001646.1-201ENST00000527936 915 ntBASIC5.2□□□□□ -1.58
CUX2O14529 AL442163.2-201ENST00000553912 710 ntBASIC5.2□□□□□ -1.58
CUX2O14529 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.2□□□□□ -1.58
CUX2O14529 AC103710.3-201ENST00000608157 948 ntBASIC5.2□□□□□ -1.58
CUX2O14529 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.2□□□□□ -1.58
CUX2O14529 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.2□□□□□ -1.58
CUX2O14529 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CUX2O14529 AC245100.2-201ENST00000454544 1679 ntBASIC5.19□□□□□ -1.58
CUX2O14529 Y_RNA.269-201ENST00000364685 89 ntBASIC5.19□□□□□ -1.58
CUX2O14529 RPL7P25-201ENST00000404151 721 ntBASIC5.19□□□□□ -1.58
CUX2O14529 RPL7P8-201ENST00000411964 730 ntBASIC5.19□□□□□ -1.58
CUX2O14529 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.19□□□□□ -1.58
CUX2O14529 VTA1P1-201ENST00000414044 866 ntBASIC5.19□□□□□ -1.58
CUX2O14529 PTP4A1P1-201ENST00000420539 515 ntBASIC5.19□□□□□ -1.58
CUX2O14529 RAB9AP5-201ENST00000437794 597 ntBASIC5.19□□□□□ -1.58
CUX2O14529 RAB9AP2-201ENST00000443911 597 ntBASIC5.19□□□□□ -1.58
CUX2O14529 RPS6P2-201ENST00000454208 705 ntBASIC5.19□□□□□ -1.58
CUX2O14529 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.19□□□□□ -1.58
CUX2O14529 RPS4XP22-201ENST00000480755 780 ntBASIC5.19□□□□□ -1.58
CUX2O14529 RN7SKP272-201ENST00000516988 232 ntBASIC5.19□□□□□ -1.58
CUX2O14529 AC109329.2-201ENST00000519658 482 ntBASIC5.19□□□□□ -1.58
CUX2O14529 AC084033.1-201ENST00000550830 633 ntBASIC5.19□□□□□ -1.58
CUX2O14529 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.19□□□□□ -1.58
CUX2O14529 AL451049.1-201ENST00000608672 497 ntBASIC5.19□□□□□ -1.58
CUX2O14529 AC107905.1-201ENST00000616204 426 ntBASIC5.19□□□□□ -1.58
CUX2O14529 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC5.19□□□□□ -1.58
CUX2O14529 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CUX2O14529 AL031985.3-201ENST00000565390 2449 ntBASIC5.18□□□□□ -1.58
CUX2O14529 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
CUX2O14529 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC5.18□□□□□ -1.58
CUX2O14529 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CUX2O14529 OR1S2-201ENST00000302592 978 ntBASIC5.18□□□□□ -1.58
CUX2O14529 SNORD15B-201ENST00000384714 146 ntBASIC5.18□□□□□ -1.58
CUX2O14529 AC106901.1-201ENST00000425086 698 ntBASIC5.18□□□□□ -1.58
CUX2O14529 MTCO1P51-201ENST00000427672 1060 ntBASIC5.18□□□□□ -1.58
CUX2O14529 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.18□□□□□ -1.58
CUX2O14529 HMGN2P3-201ENST00000433603 273 ntBASIC5.18□□□□□ -1.58
CUX2O14529 HMGN2P5-201ENST00000436882 273 ntBASIC5.18□□□□□ -1.58
CUX2O14529 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CUX2O14529 RPL7L1P1-201ENST00000448259 785 ntBASIC5.18□□□□□ -1.58
CUX2O14529 TRBV8-2-201ENST00000475637 270 ntBASIC5.18□□□□□ -1.58
CUX2O14529 SCARNA20.6-201ENST00000517251 106 ntBASIC5.18□□□□□ -1.58
CUX2O14529 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CUX2O14529 MAPK10-362ENST00000641864 4484 ntBASIC5.18□□□□□ -1.58
CUX2O14529 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms