Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNU6-559P-201ENST00000516151 98 ntBASIC5.83□□□□□ -1.48
SOX1O00570 RN7SKP96-201ENST00000516948 297 ntBASIC5.83□□□□□ -1.48
SOX1O00570 Y_RNA.718-201ENST00000517110 102 ntBASIC5.83□□□□□ -1.48
SOX1O00570 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.83□□□□□ -1.48
SOX1O00570 ZNF705CP-201ENST00000530515 889 ntBASIC5.83□□□□□ -1.48
SOX1O00570 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.83□□□□□ -1.48
SOX1O00570 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.83□□□□□ -1.48
SOX1O00570 AC068831.4-201ENST00000556118 109 ntBASIC5.83□□□□□ -1.48
SOX1O00570 DPPA3P3-201ENST00000603842 430 ntBASIC5.83□□□□□ -1.48
SOX1O00570 AP001330.4-201ENST00000604350 154 ntBASIC5.83□□□□□ -1.48
SOX1O00570 AC080078.3-201ENST00000605407 463 ntBASIC5.83□□□□□ -1.48
SOX1O00570 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.83□□□□□ -1.48
SOX1O00570 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX1O00570 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SOX1O00570 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SOX1O00570 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SOX1O00570 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
SOX1O00570 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SOX1O00570 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SOX1O00570 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX1O00570 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.83□□□□□ -1.48
SOX1O00570 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC5.83□□□□□ -1.48
SOX1O00570 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.83□□□□□ -1.48
SOX1O00570 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX1O00570 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX1O00570 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SOX1O00570 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX1O00570 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX1O00570 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.82□□□□□ -1.48
SOX1O00570 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.82□□□□□ -1.48
SOX1O00570 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX1O00570 AC092692.1-201ENST00000623625 2595 ntBASIC5.82□□□□□ -1.48
SOX1O00570 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX1O00570 ASNSP3-201ENST00000451989 1306 ntBASIC5.82□□□□□ -1.48
SOX1O00570 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX1O00570 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SOX1O00570 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SOX1O00570 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.82□□□□□ -1.48
SOX1O00570 Y_RNA.231-201ENST00000364358 102 ntBASIC5.82□□□□□ -1.48
SOX1O00570 SNORA51.6-201ENST00000384151 125 ntBASIC5.82□□□□□ -1.48
SOX1O00570 RNU6-831P-201ENST00000384548 107 ntBASIC5.82□□□□□ -1.48
SOX1O00570 RNU6-907P-201ENST00000390924 102 ntBASIC5.82□□□□□ -1.48
SOX1O00570 RNA5SP171-201ENST00000391071 115 ntBASIC5.82□□□□□ -1.48
SOX1O00570 RPL7P60-201ENST00000397636 735 ntBASIC5.82□□□□□ -1.48
SOX1O00570 PRRC2CP1-201ENST00000404428 159 ntBASIC5.82□□□□□ -1.48
SOX1O00570 AC245054.2-201ENST00000415639 319 ntBASIC5.82□□□□□ -1.48
SOX1O00570 RPS15AP12-201ENST00000419498 388 ntBASIC5.82□□□□□ -1.48
SOX1O00570 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX1O00570 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.82□□□□□ -1.48
SOX1O00570 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX1O00570 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.82□□□□□ -1.48
SOX1O00570 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX1O00570 MEMO1P4-201ENST00000453590 386 ntBASIC5.82□□□□□ -1.48
SOX1O00570 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.82□□□□□ -1.48
SOX1O00570 AURKAPS2-201ENST00000454983 333 ntBASIC5.82□□□□□ -1.48
SOX1O00570 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX1O00570 GMFBP1-201ENST00000467831 427 ntBASIC5.82□□□□□ -1.48
SOX1O00570 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX1O00570 RPL23AP41-201ENST00000484754 458 ntBASIC5.82□□□□□ -1.48
SOX1O00570 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.82□□□□□ -1.48
SOX1O00570 AC023424.1-201ENST00000496058 459 ntBASIC5.82□□□□□ -1.48
SOX1O00570 MTCO1P29-201ENST00000496868 288 ntBASIC5.82□□□□□ -1.48
SOX1O00570 SUMO2P4-201ENST00000504193 276 ntBASIC5.82□□□□□ -1.48
SOX1O00570 AC005741.1-201ENST00000511094 432 ntBASIC5.82□□□□□ -1.48
SOX1O00570 TTC39CP1-201ENST00000512513 755 ntBASIC5.82□□□□□ -1.48
SOX1O00570 RNU6-1046P-201ENST00000516538 107 ntBASIC5.82□□□□□ -1.48
SOX1O00570 RNA5SP337-201ENST00000517007 109 ntBASIC5.82□□□□□ -1.48
SOX1O00570 SNORA25.17-201ENST00000517184 124 ntBASIC5.82□□□□□ -1.48
SOX1O00570 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX1O00570 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX1O00570 IGHV1-14-201ENST00000523391 241 ntBASIC5.82□□□□□ -1.48
SOX1O00570 AC027667.1-201ENST00000545814 304 ntBASIC5.82□□□□□ -1.48
SOX1O00570 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX1O00570 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.82□□□□□ -1.48
SOX1O00570 AC034105.4-201ENST00000568304 277 ntBASIC5.82□□□□□ -1.48
SOX1O00570 AC006270.2-201ENST00000578523 652 ntBASIC5.82□□□□□ -1.48
SOX1O00570 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.82□□□□□ -1.48
SOX1O00570 AL391358.1-201ENST00000605342 190 ntBASIC5.82□□□□□ -1.48
SOX1O00570 RNU6-89P-201ENST00000606519 100 ntBASIC5.82□□□□□ -1.48
SOX1O00570 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX1O00570 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.82□□□□□ -1.48
SOX1O00570 AL122125.1-201ENST00000616999 600 ntBASIC5.82□□□□□ -1.48
SOX1O00570 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.82□□□□□ -1.48
SOX1O00570 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.82□□□□□ -1.48
SOX1O00570 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX1O00570 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX1O00570 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX1O00570 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.82□□□□□ -1.48
SOX1O00570 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SOX1O00570 AC066616.2-201ENST00000559334 1481 ntBASIC5.82□□□□□ -1.48
SOX1O00570 AL359922.3-201ENST00000624779 1670 ntBASIC5.82□□□□□ -1.48
SOX1O00570 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX1O00570 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.82□□□□□ -1.48
SOX1O00570 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.81□□□□□ -1.48
SOX1O00570 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.81□□□□□ -1.48
SOX1O00570 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SOX1O00570 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SOX1O00570 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.81□□□□□ -1.48
SOX1O00570 MTCO1P12-201ENST00000414273 1543 ntBASIC5.81□□□□□ -1.48
SOX1O00570 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms